Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trbc1A0A0A6YWV4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.02■□□□□ 0.95
Trbc1A0A0A6YWV4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trbc1A0A0A6YWV4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trbc1A0A0A6YWV4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trbc1A0A0A6YWV4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trbc1A0A0A6YWV4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trbc1A0A0A6YWV4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trbc1A0A0A6YWV4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.01■□□□□ 0.95
Trbc1A0A0A6YWV4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trbc1A0A0A6YWV4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trbc1A0A0A6YWV4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21■□□□□ 0.95
Trbc1A0A0A6YWV4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trbc1A0A0A6YWV4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trbc1A0A0A6YWV4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.99■□□□□ 0.95
Trbc1A0A0A6YWV4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trbc1A0A0A6YWV4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Trbc1A0A0A6YWV4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.98■□□□□ 0.95
Trbc1A0A0A6YWV4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.98■□□□□ 0.95
Trbc1A0A0A6YWV4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trbc1A0A0A6YWV4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trbc1A0A0A6YWV4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trbc1A0A0A6YWV4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trbc1A0A0A6YWV4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trbc1A0A0A6YWV4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trbc1A0A0A6YWV4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trbc1A0A0A6YWV4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.95■□□□□ 0.94
Trbc1A0A0A6YWV4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Trbc1A0A0A6YWV4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trbc1A0A0A6YWV4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trbc1A0A0A6YWV4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.95■□□□□ 0.94
Trbc1A0A0A6YWV4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trbc1A0A0A6YWV4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trbc1A0A0A6YWV4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trbc1A0A0A6YWV4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trbc1A0A0A6YWV4 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.94■□□□□ 0.94
Trbc1A0A0A6YWV4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trbc1A0A0A6YWV4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trbc1A0A0A6YWV4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Trbc1A0A0A6YWV4 Gm4799-201ENSMUST00000095396 657 ntBASIC20.93■□□□□ 0.94
Trbc1A0A0A6YWV4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbc1A0A0A6YWV4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbc1A0A0A6YWV4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbc1A0A0A6YWV4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trbc1A0A0A6YWV4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trbc1A0A0A6YWV4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trbc1A0A0A6YWV4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.9■□□□□ 0.94
Trbc1A0A0A6YWV4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trbc1A0A0A6YWV4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trbc1A0A0A6YWV4 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.89■□□□□ 0.93
Trbc1A0A0A6YWV4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trbc1A0A0A6YWV4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trbc1A0A0A6YWV4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trbc1A0A0A6YWV4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.89■□□□□ 0.93
Trbc1A0A0A6YWV4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbc1A0A0A6YWV4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trbc1A0A0A6YWV4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trbc1A0A0A6YWV4 Gm6311-201ENSMUST00000073790 878 ntBASIC20.88■□□□□ 0.93
Trbc1A0A0A6YWV4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trbc1A0A0A6YWV4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbc1A0A0A6YWV4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.86■□□□□ 0.93
Trbc1A0A0A6YWV4 Mir3960-201ENSMUST00000198213 73 ntBASIC20.86■□□□□ 0.93
Trbc1A0A0A6YWV4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbc1A0A0A6YWV4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbc1A0A0A6YWV4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbc1A0A0A6YWV4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.85■□□□□ 0.93
Trbc1A0A0A6YWV4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.85■□□□□ 0.93
Trbc1A0A0A6YWV4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.85■□□□□ 0.93
Trbc1A0A0A6YWV4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trbc1A0A0A6YWV4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Trbc1A0A0A6YWV4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trbc1A0A0A6YWV4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbc1A0A0A6YWV4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trbc1A0A0A6YWV4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.82■□□□□ 0.92
Trbc1A0A0A6YWV4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbc1A0A0A6YWV4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbc1A0A0A6YWV4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trbc1A0A0A6YWV4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.81■□□□□ 0.92
Trbc1A0A0A6YWV4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trbc1A0A0A6YWV4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trbc1A0A0A6YWV4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Trbc1A0A0A6YWV4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms