Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav12-3A0A075B648 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-3A0A075B648 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-3A0A075B648 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav12-3A0A075B648 Rab21-202ENSMUST00000218831 843 ntBASIC16.86■□□□□ 0.29
Trav12-3A0A075B648 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav12-3A0A075B648 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav12-3A0A075B648 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
Trav12-3A0A075B648 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav12-3A0A075B648 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-3A0A075B648 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trav12-3A0A075B648 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-3A0A075B648 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-3A0A075B648 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trav12-3A0A075B648 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav12-3A0A075B648 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-3A0A075B648 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-3A0A075B648 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-3A0A075B648 Gm25238-201ENSMUST00000174914 89 ntBASIC16.82■□□□□ 0.28
Trav12-3A0A075B648 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.82■□□□□ 0.28
Trav12-3A0A075B648 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav12-3A0A075B648 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-3A0A075B648 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trav12-3A0A075B648 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-3A0A075B648 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-3A0A075B648 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav12-3A0A075B648 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav12-3A0A075B648 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-3A0A075B648 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-3A0A075B648 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav12-3A0A075B648 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav12-3A0A075B648 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-3A0A075B648 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-3A0A075B648 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav12-3A0A075B648 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav12-3A0A075B648 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav12-3A0A075B648 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trav12-3A0A075B648 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trav12-3A0A075B648 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.77■□□□□ 0.28
Trav12-3A0A075B648 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Trav12-3A0A075B648 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-3A0A075B648 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-3A0A075B648 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-3A0A075B648 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav12-3A0A075B648 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-3A0A075B648 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav12-3A0A075B648 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.76■□□□□ 0.27
Trav12-3A0A075B648 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trav12-3A0A075B648 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav12-3A0A075B648 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav12-3A0A075B648 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav12-3A0A075B648 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-3A0A075B648 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-3A0A075B648 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-3A0A075B648 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav12-3A0A075B648 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Trav12-3A0A075B648 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav12-3A0A075B648 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav12-3A0A075B648 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-3A0A075B648 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-3A0A075B648 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav12-3A0A075B648 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-3A0A075B648 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trav12-3A0A075B648 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav12-3A0A075B648 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav12-3A0A075B648 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-3A0A075B648 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-3A0A075B648 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav12-3A0A075B648 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-3A0A075B648 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav12-3A0A075B648 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav12-3A0A075B648 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trav12-3A0A075B648 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-3A0A075B648 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav12-3A0A075B648 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms