RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 HIST1H2ACQ93077 130 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 TMLHEQ9NVH6 421 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 PCDH7O60245 1069 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 PSMA1P25786 263 aaKnown RBP15.82■□□□□ 0.12
GABRB3-215ENST00000622697 MAT2AP31153 395 aaKnown RBP15.82■□□□□ 0.12
GABRB3-215ENST00000622697 ARFGAP1Q8N6T3 406 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 TRIM63Q969Q1 353 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 DIRAS2Q96HU8 199 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 RIOK2Q9BVS4 552 aaKnown RBP15.82■□□□□ 0.12
GABRB3-215ENST00000622697 AASDHPPTQ9NRN7 309 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 ACTR3BQ9P1U1 418 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 J3QRK9 145 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 SAGP10523 405 aaPredicted RBP15.82■□□□□ 0.12
GABRB3-215ENST00000622697 MYL9P24844 172 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 UBXN11Q5T124 520 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 CES5AQ6NT32 575 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 ERMP1Q7Z2K6 904 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 ZZZ3Q8IYH5 903 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 OR14C36Q8NHC7 312 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 FBXL8Q96CD0 374 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 MIR1-1HGQ9H1L0 117 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 ADAMTS10Q9H324 1103 aa15.82■□□□□ 0.12
GABRB3-215ENST00000622697 DNTTP04053 509 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 SERINC3Q13530 473 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 IL18Q14116 193 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 TGFBIQ15582 683 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 UPP1Q16831 310 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 NDUFAF6Q330K2 333 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.81■□□□□ 0.12
GABRB3-215ENST00000622697 SMYD5Q6GMV2 418 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 Q6ZVU0 165 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 RAB2BQ8WUD1 216 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 KIAA1191Q96A73 305 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 SLC2A13Q96QE2 648 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 TMEM248Q9NWD8 314 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 MYH1P12882 1939 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 CCNKO75909 580 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 C4BPBP20851 252 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 CAP1Q01518 475 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 NPTX1Q15818 432 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 ASRGL1Q7L266 308 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 KLHL23Q8NBE8 558 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 SMURF2Q9HAU4 748 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 ZIM2Q9NZV7 527 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 FZD4Q9ULV1 537 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 LAMB4A4D0S4 1761 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 URADA6NGE7 173 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 TMEM88BA6NKF7 163 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 STATHP02808 62 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 PRNPP04156 253 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 HOXA11P31270 313 aaPredicted RBP15.81■□□□□ 0.12
GABRB3-215ENST00000622697 TRIM32Q13049 653 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 ANKRD26P1Q6NSI1 321 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 POMZP3Q6PJE2 187 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 RGL4Q8IZJ4 473 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 KREMEN2Q8NCW0 462 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 KBTBD7Q8WVZ9 684 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 TMEM40Q8WWA1 233 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 AP3S1Q92572 193 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 DERL2Q9GZP9 239 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.81■□□□□ 0.12
GABRB3-215ENST00000622697 EURLQ9NYK6 297 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 TVP23BQ9NYZ1 205 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 MARCH4Q9P2E8 410 aaPredicted RBP15.81■□□□□ 0.12
GABRB3-215ENST00000622697 GPR32O75388 356 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 ALOX5P09917 674 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 LINGO3P0C6S8 592 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 CARD16Q5EG05 197 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 CMTM8Q8IZV2 173 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 IGSF8Q969P0 613 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 YIPF4Q9BSR8 244 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 VPS29Q9UBQ0 182 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 SLC11A1P49279 550 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 NIPAL4Q0D2K0 466 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 MEP1AQ16819 746 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 OR10T2Q8NGX3 314 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 C2orf15Q8WU43 125 aaKnown RBP15.81■□□□□ 0.12
GABRB3-215ENST00000622697 ARMC5Q96C12 935 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 SMG9Q9H0W8 520 aaKnown RBP15.81■□□□□ 0.12
GABRB3-215ENST00000622697 ZDHHC3Q9NYG2 299 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 CFAP20Q9Y6A4 193 aaKnown RBP15.81■□□□□ 0.12
GABRB3-215ENST00000622697 NAV1Q8NEY1 1877 aa15.81■□□□□ 0.12
GABRB3-215ENST00000622697 TBX1O43435 398 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 PRAMEF11O60813 436 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 NME6O75414 186 aaPredicted RBP15.8■□□□□ 0.12
GABRB3-215ENST00000622697 EDNRBP24530 442 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 NUDT6P53370 316 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 EIF2B5Q13144 721 aaKnown RBP15.8■□□□□ 0.12
GABRB3-215ENST00000622697 CEACAM7Q14002 265 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 CGB2Q6NT52 195 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 AGMOQ6ZNB7 445 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 C1orf52Q8N6N3 182 aaKnown RBP15.8■□□□□ 0.12
GABRB3-215ENST00000622697 RELTQ969Z4 430 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 HSPBAP1Q96EW2 488 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 SLC32A1Q9H598 525 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 KAT8Q9H7Z6 458 aaKnown RBP15.8■□□□□ 0.12
GABRB3-215ENST00000622697 CD320Q9NPF0 282 aa15.8■□□□□ 0.12
GABRB3-215ENST00000622697 PHPT1Q9NRX4 125 aaPredicted RBP15.8■□□□□ 0.12
GABRB3-215ENST00000622697 MCUBQ9NWR8 336 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms