RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CXorf40BQ96DE9 158 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 CHMP6Q96FZ7 201 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 ELF4Q99607 663 aaPredicted RBP17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 TMEM79Q9BSE2 394 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 FSCN3Q9NQT6 498 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 PLAGL1Q9UM63 463 aa17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 TNPO3Q9Y5L0 923 aaKnown RBP17.33■□□□□ 0.36
PTCHD3-202ENST00000622555 CABIN1Q9Y6J0 2220 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 SUPT7LO94864 414 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC16A8O95907 504 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 VIMP08670 466 aaKnown RBP17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC2A4P14672 509 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 ARRB1P49407 418 aaPredicted RBP17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 GRIK2Q13002 908 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 UNC50Q53HI1 259 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 ANKS6Q68DC2 871 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 IYDQ6PHW0 289 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 RPS27LQ71UM5 84 aaKnown RBP17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 LOXL4Q96JB6 756 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 STOX2Q9P2F5 926 aaPredicted RBP17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 ZNF624Q9P2J8 865 aaPredicted RBP17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 POLG2Q9UHN1 485 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 ASB1Q9Y576 335 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 COLEC10Q9Y6Z7 277 aa17.32■□□□□ 0.36
PTCHD3-202ENST00000622555 PATE3B3GLJ2 98 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 TMEM114B3SHH9 223 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 B4DGG1 531 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 CCNT2O60583 730 aaKnown RBP17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 LYPLA1O75608 230 aaPredicted RBP17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 EPN2O95208 641 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 RPS17P08708 135 aaKnown RBP17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC1A6P48664 564 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 ABCE1P61221 599 aaKnown RBP17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 RCN2Q14257 317 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 GRB7Q14451 532 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 PCBP2Q15366 365 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 TRIM61Q5EBN2 209 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 C6orf89Q6UWU4 347 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 FAM47EQ6ZV65 393 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 TRIM48Q8IWZ4 208 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 ZDHHC1Q8WTX9 485 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 PATE1Q8WXA2 126 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 CAMK1GQ96NX5 476 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 LRFN3Q9BTN0 628 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 CD244Q9BZW8 370 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 ATG10Q9H0Y0 220 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 ZNF395Q9H8N7 513 aaPredicted RBP17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 CAPN10Q9HC96 672 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 UCKL1Q9NWZ5 548 aa17.31■□□□□ 0.36
PTCHD3-202ENST00000622555 CACNA1HO95180 2353 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 PRAMEF33A0A0G2JMD5 474 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 OR5K4A6NMS3 321 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 YY2O15391 372 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ITM2AO43736 263 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 NPHS1O60500 1241 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 STK16O75716 305 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ANXA6P08133 673 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 NDUFS1P28331 727 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 IMPA1P29218 277 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC19A1P41440 591 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 GDF5P43026 501 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 CCR10P46092 362 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 AGTRAPQ6RW13 159 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 FRMD7Q6ZUT3 714 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SYTL1Q8IYJ3 562 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 NAGSQ8N159 534 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SDR16C5Q8N3Y7 309 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 CNDP1Q96KN2 507 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 NSUN5Q96P11 429 aaKnown RBP17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 IL17FQ96PD4 163 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 C1QTNF3Q9BXJ4 246 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 DRC3Q9H069 523 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 GSTO2Q9H4Y5 243 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SLCO1B3Q9NPD5 702 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 THAP1Q9NVV9 213 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 PCTPQ9UKL6 214 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC6A14Q9UN76 642 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 PCM1Q15154 2024 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 RALGAPA1Q6GYQ0 2036 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 KIR2DS5A0A0G2JLQ3 304 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 A0A0G2JNG1 304 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 LMO7DNF2Z398 122 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 KIR2DS3K7RE56 304 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SNNO75324 88 aaPredicted RBP17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 HSPA4LO95757 839 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ARRB2P32121 409 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 GGT5P36269 586 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 MPLP40238 635 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 RXRGP48443 463 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 CDH13P55290 713 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 KIR2DS5Q14953 304 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ZNF423Q2M1K9 1284 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 ZXDCQ2QGD7 858 aaPredicted RBP17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 DEFB133Q30KQ1 61 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 HLA-BQ31612 363 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 PTCHD3Q3KNS1 767 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SLC23A3Q6PIS1 610 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 SFTPA2Q8IWL1 248 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 LRRC34Q8IZ02 419 aa17.3■□□□□ 0.36
PTCHD3-202ENST00000622555 RAB42Q8N4Z0 105 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms