RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PAX7P23759 505 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 CPSF6Q16630 551 aaKnown RBP eCLIP19.21■□□□□ 0.67
CLIP3-206ENST00000593074 NRF1Q16656 503 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 PTCHD3Q3KNS1 767 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 SGO1Q5FBB7 561 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 ETFBKMTQ8IXQ9 262 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 ZNF366Q8N895 744 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 BTN2A2Q8WVV5 523 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 FGF13Q92913 245 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 CIB1Q99828 191 aa19.21■□□□□ 0.67
CLIP3-206ENST00000593074 C7orf72A4D263 438 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 SEC22BO75396 215 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 SLC6A11P48066 632 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 ZNF284Q2VY69 593 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 NEK5Q6P3R8 708 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 OR8J3Q8NGG0 315 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 MCOLN3Q8TDD5 553 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 NUDT8Q8WV74 236 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 CLMPQ9H6B4 373 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 ZFP14Q9HCL3 533 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 DEC1Q9P2X7 70 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 SNX6Q9UNH7 406 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 KCNH1O95259 989 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 PDYNP01213 254 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 GSTM1P09488 218 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 PRPH2P23942 346 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 HRH2P25021 359 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 GSTM4Q03013 218 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 CYP51A1Q16850 503 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 USP39Q53GS9 565 aaKnown RBP19.2■□□□□ 0.66
CLIP3-206ENST00000593074 LDLRAP1Q5SW96 308 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 SUSD1Q6UWL2 747 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 LIPIQ6XZB0 460 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 PARS2Q7L3T8 475 aaKnown RBP19.2■□□□□ 0.66
CLIP3-206ENST00000593074 PROSER1Q86XN7 944 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 BEND7Q8N7W2 519 aaPredicted RBP19.2■□□□□ 0.66
CLIP3-206ENST00000593074 PAPD5Q8NDF8 572 aaKnown RBP19.2■□□□□ 0.66
CLIP3-206ENST00000593074 TRPV3Q8NET8 790 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 VN1R2Q8NFZ6 395 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 FBXL8Q96CD0 374 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 CNBD2Q96M20 576 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 PPM1MQ96MI6 270 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 SLC29A1Q99808 456 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 OSBPL11Q9BXB4 747 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 DPY30Q9C005 99 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 ZNHIT2Q9UHR6 403 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 PCDHB3Q9Y5E6 796 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 AK5Q9Y6K8 562 aa19.2■□□□□ 0.66
CLIP3-206ENST00000593074 KANSL1LA0AUZ9 987 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 HEPACAM2A8MVW5 462 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 NPIPB8E9PQR5 432 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 INPP4BO15327 924 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 IL6P05231 212 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 ELFN1P0C7U0 828 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 UMPSP11172 480 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 NCK1P16333 377 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 PBX2P40425 430 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 PRKCQQ04759 706 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 POM121L1PQ3SYA9 428 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 FAM174BQ3ZCQ3 159 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 PPP4R4Q6NUP7 873 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 ERAP2Q6P179 960 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 CHERPQ8IWX8 916 aaKnown RBP19.19■□□□□ 0.66
CLIP3-206ENST00000593074 GTF2H4Q92759 462 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 GLYATL1Q969I3 302 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 NXPE3Q969Y0 559 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 GBP5Q96PP8 586 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 DNAJC11Q9NVH1 559 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 PCDHGB4Q9UN71 923 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 USP22Q9UPT9 525 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 PCDHGB5Q9Y5G0 923 aa19.19■□□□□ 0.66
CLIP3-206ENST00000593074 OR2AG2A6NM03 316 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 PRRT4C9JH25 899 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 PSMD11O00231 422 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 SMIM18P0DKX4 95 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 FCGR1AP12314 374 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 BCKDHAP12694 445 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 OR4D2P58180 307 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 KCNC3Q14003 757 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 SELPLGQ14242 412 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 INTS11Q5TA45 600 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 NRSN1Q8IZ57 195 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 PACRGLQ8N7B6 248 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 SELENOMQ8WWX9 145 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 PYCR2Q96C36 320 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 LMAN2LQ9H0V9 348 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 ELOVL6Q9H5J4 265 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 RPF2Q9H7B2 306 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 THG1LQ9NWX6 298 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 MAGEL2Q9UJ55 1249 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 MUC22E2RYF6 1773 aaPredicted RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 SERTM1A2A2V5 107 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 TMEM202A6NGA9 273 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 PSIP1O75475 530 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 PGRP06401 933 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 FASP25445 335 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 PRLHRP49683 370 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 MTPNP58546 118 aa19.18■□□□□ 0.66
CLIP3-206ENST00000593074 TXNL4AP83876 142 aaKnown RBP19.18■□□□□ 0.66
CLIP3-206ENST00000593074 MESP2Q0VG99 397 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms