RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 C1orf122Q6ZSJ8 110 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 TBC1D1Q86TI0 1168 aaPredicted RBP2.07□□□□□ -2.08
TOP2A-202ENST00000577541 CEP57Q86XR8 500 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 LACC1Q8IV20 430 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 KIRREL3Q8IZU9 778 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 DNAJC22Q8N4W6 341 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 TTC39CQ8N584 583 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 OR10G8Q8NGN5 311 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 OR13J1Q8NGT2 312 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 OR2AJ1Q8NGZ0 328 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 ZFAND2BQ8WV99 257 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 IRGQQ8WZA9 623 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 SUSD6Q92537 303 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 AZIN2Q96A70 460 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 DHX58Q96C10 678 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 NSL1Q96IY1 281 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 TRAF4Q9BUZ4 470 aaPredicted RBP2.07□□□□□ -2.08
TOP2A-202ENST00000577541 CLEC7AQ9BXN2 247 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 CHMP1AQ9HD42 196 aaPredicted RBP2.07□□□□□ -2.08
TOP2A-202ENST00000577541 KRT84Q9NSB2 600 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 OSER1Q9NX31 292 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 HACL1Q9UJ83 578 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.07□□□□□ -2.08
TOP2A-202ENST00000577541 PCNX3Q9H6A9 2034 aa2.07□□□□□ -2.08
TOP2A-202ENST00000577541 IGHV3OR16-10A0A075B7F0 116 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 HYKKA2RU49 373 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 MPTX1A8MV57 137 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 O00370 1275 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 SOCS3O14543 225 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 GLRA3O75311 464 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 KRT33AO76009 404 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 GP1BBP13224 206 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 TRIM21P19474 475 aaKnown RBP2.06□□□□□ -2.08
TOP2A-202ENST00000577541 CYP2A7P20853 494 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 HNF4AP41235 474 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 LEPRP48357 1165 aaKnown RBP2.06□□□□□ -2.08
TOP2A-202ENST00000577541 PDX1P52945 283 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 MFAP4P55083 255 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 SP3Q02447 781 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 NFATC2Q13469 925 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 LY6DQ14210 128 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 RALBP1Q15311 655 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 HLA-BQ31612 363 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 ITPRIPL2Q3MIP1 535 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 DUSP28Q4G0W2 176 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 FASTKD1Q53R41 847 aaKnown RBP2.06□□□□□ -2.08
TOP2A-202ENST00000577541 C20orf194Q5TEA3 1177 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 ZNF774Q6NX45 483 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 FAM180BQ6P0A1 224 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 DOK6Q6PKX4 331 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 SLC25A47Q6Q0C1 308 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 FIGLAQ6QHK4 219 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 Q6ZRP5 223 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 LRRTM1Q86UE6 522 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 C11orf53Q8IXP5 236 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.06□□□□□ -2.08
TOP2A-202ENST00000577541 NPEPL1Q8NDH3 523 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 PTPMT1Q8WUK0 201 aaPredicted RBP2.06□□□□□ -2.08
TOP2A-202ENST00000577541 GATAD1Q8WUU5 269 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 SLCO2A1Q92959 643 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 MAGED4Q96JG8 741 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 USP28Q96RU2 1077 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 IWS1Q96ST2 819 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 MMP27Q9H306 513 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 EIF2B3Q9NR50 452 aaKnown RBP2.06□□□□□ -2.08
TOP2A-202ENST00000577541 TUBE1Q9UJT0 475 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 WDR37Q9Y2I8 494 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 RIPK3Q9Y572 518 aa2.06□□□□□ -2.08
TOP2A-202ENST00000577541 LOC100509620A0A075B734 347 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 LOC102723996A0A087X1L8 192 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 ANKUB1A6NFN9 424 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 VILLO15195 856 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 TOMM70O94826 608 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 NXPH2O95156 264 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 OR2T7P0C7T2 308 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 DANCRP0C864 163 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 CDC25CP30307 473 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 PTGER3P43115 390 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 NKX2-1P43699 371 aaPredicted RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 ARF3P61204 181 aaPredicted RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 TMF1P82094 1093 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 ARF1P84077 181 aaKnown RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 CYCSP99999 105 aaKnown RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 MAT1AQ00266 395 aaKnown RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 GUCY2DQ02846 1103 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 ELAVL2Q12926 359 aaKnown RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 TNIP1Q15025 636 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 RRS1Q15050 365 aaKnown RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 C15orf59Q2T9L4 293 aaPredicted RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 KLHL26Q53HC5 615 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 SPDYCQ5MJ68 293 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 TMCO3Q6UWJ1 677 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 CLEC4GQ6UXB4 293 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 AACSQ86V21 672 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 CDC20BQ86Y33 519 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 RAB42Q8N4Z0 105 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 NIPA2Q8N8Q9 360 aa2.05□□□□□ -2.08
TOP2A-202ENST00000577541 C1orf131Q8NDD1 294 aaKnown RBP2.05□□□□□ -2.08
TOP2A-202ENST00000577541 OR10S1Q8NGN2 331 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms