RNA–Protein interactions for RNA: ENST00000577268.1

CCDC178-206, Transcript of coiled-coil domain containing 178, humanhuman

TSL 5

Gene CCDC178, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-206ENST00000577268 TLE2Q04725 743 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 TMEM115Q12893 351 aaPredicted RBP2.38□□□□□ -2.03
CCDC178-206ENST00000577268 PDLIM3Q53GG5 364 aaPredicted RBP2.38□□□□□ -2.03
CCDC178-206ENST00000577268 SLC25A53Q5H9E4 307 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 GRTP1Q5TC63 336 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 WDR78Q5VTH9 848 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 RNLSQ5VYX0 342 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 PHC2Q8IXK0 858 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 ZC3H3Q8IXZ2 948 aaKnown RBP2.38□□□□□ -2.03
CCDC178-206ENST00000577268 TMTC2Q8N394 836 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 TSPYL6Q8N831 410 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 GPATCH11Q8N954 259 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 GATAD1Q8WUU5 269 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 PHLDA1Q8WV24 401 aaPredicted RBP2.38□□□□□ -2.03
CCDC178-206ENST00000577268 TRIM63Q969Q1 353 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 ZNF597Q96LX8 424 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 RPS6KC1Q96S38 1066 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 NAP1L4Q99733 375 aaKnown RBP2.38□□□□□ -2.03
CCDC178-206ENST00000577268 NKX3-1Q99801 234 aaPredicted RBP2.38□□□□□ -2.03
CCDC178-206ENST00000577268 NUP85Q9BW27 656 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 TEX13BQ9BXU2 312 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 S1PR5Q9H228 398 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 PLCL2Q9UPR0 1127 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 KDM3AQ9Y4C1 1321 aa2.38□□□□□ -2.03
CCDC178-206ENST00000577268 EPHB6O15197 1021 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 OGG1O15527 345 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 WDHD1O75717 1129 aaPredicted RBP2.37□□□□□ -2.03
CCDC178-206ENST00000577268 SLC2A2P11168 524 aaPredicted RBP2.37□□□□□ -2.03
CCDC178-206ENST00000577268 PDHA2P29803 388 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 PDX1P52945 283 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 PPP2R2BQ00005 443 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 CEBPZQ03701 1054 aaKnown RBP2.37□□□□□ -2.03
CCDC178-206ENST00000577268 TNIP1Q15025 636 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 EFTUD2Q15029 972 aaKnown RBP eCLIP2.37□□□□□ -2.03
CCDC178-206ENST00000577268 GLDNQ6ZMI3 551 aaPredicted RBP2.37□□□□□ -2.03
CCDC178-206ENST00000577268 CHMP1BQ7LBR1 199 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 CNTROBQ8N137 903 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 OR1L3Q8NH93 324 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 ZNF285Q96NJ3 590 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 DDOQ99489 341 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 PIP5K1AQ99755 562 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 PDFQ9HBH1 243 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 SMC4Q9NTJ3 1288 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 P4HTMQ9NXG6 502 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 WIPI2Q9Y4P8 454 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 COMMD10Q9Y6G5 202 aa2.37□□□□□ -2.03
CCDC178-206ENST00000577268 IGKV6-21A0A0C4DH24 114 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 EIF3FO00303 357 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 GLRA3O75311 464 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 CDK2AP2O75956 126 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 GH2P01242 217 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 THY1P04216 161 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 PAX3P23760 479 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 RPL21P46778 160 aaKnown RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 TRAPPC10P48553 1259 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 GALCP54803 685 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 MAZP56270 477 aaKnown RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 SNRPEP62304 92 aaKnown RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 PNRC1Q12796 327 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 ZRSR2Q15696 482 aaKnown RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 DLG2Q15700 870 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 ZNF79Q15937 498 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 MS4A18Q3C1V0 323 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 C2orf83Q53S99 150 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 EID3Q8N140 333 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 TBC1D16Q8TBP0 767 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 NAP1L5Q96NT1 182 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 MAP3K3Q99759 626 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 ISCA1Q9BUE6 129 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 C1QTNF1Q9BXJ1 281 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 ADNPQ9H2P0 1102 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 ZNF701Q9NV72 531 aaPredicted RBP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 CACNG4Q9UBN1 327 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.36□□□□□ -2.03
CCDC178-206ENST00000577268 CYP46A1Q9Y6A2 500 aa2.36□□□□□ -2.03
CCDC178-206ENST00000577268 KAT6BQ8WYB5 2073 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 IGHV4-30-2A0A087WSY4 118 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 A0A1W2PQF6 199 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 NPHP1O15259 732 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 IGKV3-11P04433 115 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 EPHA8P29322 1005 aaPredicted RBP2.35□□□□□ -2.03
CCDC178-206ENST00000577268 SLC6A6P31641 620 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 ICAM3P32942 547 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 HARS2P49590 506 aaKnown RBP2.35□□□□□ -2.03
CCDC178-206ENST00000577268 RPL7AP62424 266 aaKnown RBP2.35□□□□□ -2.03
CCDC178-206ENST00000577268 LMOD3Q0VAK6 560 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 PPFIA1Q13136 1202 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 TRPC3Q13507 836 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 TAF12Q16514 161 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 HERC4Q5GLZ8 1057 aaPredicted RBP2.35□□□□□ -2.03
CCDC178-206ENST00000577268 FAM182AQ5T1J6 154 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 LCN1P1Q5VSP4 162 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 INO80CQ6PI98 192 aaPredicted RBP2.35□□□□□ -2.03
CCDC178-206ENST00000577268 TMEM139Q8IV31 216 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 OR4N5Q8IXE1 308 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 TMEM116Q8NCL8 245 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 OR13J1Q8NGT2 312 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 IRGQQ8WZA9 623 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 SLC39A13Q96H72 371 aa2.35□□□□□ -2.03
CCDC178-206ENST00000577268 MPHOSPH6Q99547 160 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms