RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 EEF1AKMT1Q8WVE0 214 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 KCTD13Q8WZ19 329 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 NCSTNQ92542 709 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SH3YL1Q96HL8 342 aaPredicted RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 TINF2Q9BSI4 451 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ATG10Q9H0Y0 220 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SGK2Q9HBY8 427 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 TMEM138Q9NPI0 162 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAP10Q9P2G4 905 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 PFDN2Q9UHV9 154 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAN2B2Q9Y2E5 1009 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAP4K5Q9Y4K4 846 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 MYO18AQ92614 2054 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SMIM35A0A1B0GVV1 85 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 TCRBV3S1A0A5B6 114 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLITRK5O94991 958 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 NCS1P62166 190 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 POLR2LP62875 67 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZNF33AQ06730 810 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 CLCA4Q14CN2 919 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SUZ12Q15022 739 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 DPY19L1Q2PZI1 675 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 SIRPB2Q5JXA9 342 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 HECTD3Q5T447 861 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 LGI4Q8N135 537 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 MEIOBQ8N635 442 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR52L1Q8NGH7 329 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 NSUN5Q96P11 429 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 DSN1Q9H410 356 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 MRM3Q9HC36 420 aaKnown RBP12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 TMEM181Q9P2C4 612 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 PHF11Q9UIL8 331 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 HSPB11Q9Y547 144 aa12.87□□□□□ -0.35
PCDHGB3-201ENST00000576222 LCHNA4D1U4 455 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 I3L521 148 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 SMIM18P0DKX4 95 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC2A2P11168 524 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 RCVRNP35243 200 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 PIK3R6Q5UE93 754 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 ANKRD26P1Q6NSI1 321 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 CCDC28AQ8IWP9 274 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR7D4Q8NG98 312 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 TRIT1Q9H3H1 467 aaKnown RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 C12orf4Q9NQ89 552 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 THUMPD1Q9NXG2 353 aaKnown RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 GULP1Q9UBP9 304 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 KCTD3Q9Y597 815 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC28A2O43868 658 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 CHIT1Q13231 466 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 ANKDD1AQ495B1 522 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 HAPLN2Q9GZV7 340 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 VRTNQ9H8Y1 702 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 MCUBQ9NWR8 336 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 SLC27A5Q9Y2P5 690 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 CPQQ9Y646 472 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 ADM5C9JUS6 153 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 INSIG1O15503 277 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 PRAMEF1O95521 474 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 BUD31P41223 144 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 TAF1AQ15573 450 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 ARRDC4Q8NCT1 418 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR4F6Q8NGB9 312 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 OR6K2Q8NGY2 324 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 KLRG1Q96E93 195 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 UROC1Q96N76 676 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 IL4I1Q96RQ9 567 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 ZCCHC2Q9C0B9 1178 aaKnown RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 DERL2Q9GZP9 239 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 TTYH1Q9H313 450 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 TAS2R7Q9NYW3 318 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 SEC14L3Q9UDX4 400 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 BAIAP2Q9UQB8 552 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 DNAJC15Q9Y5T4 150 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 TTC24A2A3L6 582 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 IQCF5A8MTL0 148 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 PDHXO00330 501 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 KPNA6O60684 536 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 PAX3P23760 479 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 CLCNKBP51801 687 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 MAPK12P53778 367 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 PITX1P78337 314 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 CD47Q08722 323 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 PHACTR4Q8IZ21 702 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 ARNTL2Q8WYA1 636 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 B3GALT6Q96L58 329 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 SEMA3GQ9NS98 782 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 PAQR5Q9NXK6 330 aaPredicted RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 CLEC4AQ9UMR7 237 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 B3GNT3Q9Y2A9 372 aa12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 RPL36Q9Y3U8 105 aaKnown RBP12.86□□□□□ -0.35
PCDHGB3-201ENST00000576222 B4GAT1O43505 415 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 ENGP17813 658 aa12.85□□□□□ -0.35
PCDHGB3-201ENST00000576222 NTSP30990 170 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms