RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GSTM1P09488 218 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ITGAXP20702 1163 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 HTR1EP28566 365 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ARSFP54793 590 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 GSTM4Q03013 218 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 TFDP2Q14188 446 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 RBBP7Q16576 425 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 NKG7Q16617 165 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ZNF630Q2M218 657 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 KRTAP21-3Q3LHN1 58 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 VWA2Q5GFL6 755 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ZNF324BQ6AW86 544 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 MTFR2Q6P444 385 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 GFRALQ6UXV0 394 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 RPTNQ6XPR3 784 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 LINC00696Q6ZRV3 163 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 SNX20Q7Z614 316 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 MRGPRGQ86SM5 289 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 DNAJC22Q8N4W6 341 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ZNF808Q8N4W9 903 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 OR5AR1Q8NGP9 310 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 FLVCR1-AS1Q8TAF5 88 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 NR4A3Q92570 626 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 IQCDQ96DY2 449 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 CCDC120Q96HB5 630 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 THOC3Q96J01 351 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 LMF1Q96S06 567 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 FICDQ9BVA6 458 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 SLC26A1Q9H2B4 701 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 SEMA3GQ9NS98 782 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 DDX56Q9NY93 547 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 SPHK1Q9NYA1 384 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ZDHHC3Q9NYG2 299 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 EURLQ9NYK6 297 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ITGB1BP2Q9UKP3 347 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 TRHDEQ9UKU6 1024 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 CAPN11Q9UMQ6 739 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 ASF1AQ9Y294 204 aa11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 LUC7L2Q9Y383 392 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-209ENST00000568569 MYO7BQ6PIF6 2116 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 TRGV8A0A0C4DH27 118 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 DYTNA2CJ06 578 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 CST8O60676 142 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 ANXA9O76027 345 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 CRTAMO95727 393 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 SNRPB2P08579 225 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 TMEM253P0C7T8 217 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 PBX1P40424 430 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 ARHGAP25P42331 645 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 CDKN2BP42772 138 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 GCGRP47871 477 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 GEMP55040 296 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 ARG2P78540 354 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 FANCCQ00597 558 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 KIR2DS3Q14952 304 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 SLC18A3Q16572 532 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 GPR33Q49SQ1 333 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 MFSD7Q6UXD7 560 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 TTLL10Q6ZVT0 673 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 COX15Q7KZN9 410 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 TBC1D21Q8IYX1 336 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 CATSPER1Q8NEC5 780 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 OR11G2Q8NGC1 345 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 OR1N1Q8NGS0 311 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 OR13C4Q8NGS5 318 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 SLC35G2Q8TBE7 412 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 P3H4Q92791 437 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 C19orf43Q9BQ61 176 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 ANP32EQ9BTT0 268 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 TRIM8Q9BZR9 551 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 GBA3Q9H227 469 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 FAM96AQ9H5X1 160 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 SOX17Q9H6I2 414 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 CTSFQ9UBX1 484 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 POLG2Q9UHN1 485 aa11.33□□□□□ -0.6
GTF3C1-209ENST00000568569 TRAV17A0A0B4J275 112 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 ISM1B1AKI9 464 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 LIN7AO14910 233 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 KDM1AO60341 852 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 USP1O94782 785 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 KLHL18O94889 574 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 ACRV1P26436 265 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 ZNF140P52738 457 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 Q0VFX4 171 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 TAZQ16635 292 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.61e-7■□□□□ 9.7
GTF3C1-209ENST00000568569 YOD1Q5VVQ6 348 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 KAZNQ674X7 775 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 TMEM207Q6UWW9 146 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 RANBP10Q6VN20 620 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 SHISA6Q6ZSJ9 500 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 SERPINA9Q86WD7 417 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.64e-7■■■■■ 27
GTF3C1-209ENST00000568569 TAAR6Q96RI8 345 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 TDRKHQ9Y2W6 561 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 ANKRD12Q6UB98 2062 aa11.32□□□□□ -0.6
GTF3C1-209ENST00000568569 TRBV5-4A0A0C4DH59 114 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 HACD1B0YJ81 288 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 CCL21O00585 134 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 DSCR3O14972 297 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms