RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 SHBQ15464 509 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 CCSMST1Q4G0I0 132 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 FBXO48Q5FWF7 155 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 DUS1LQ6P1R4 473 aaKnown RBP11.32□□□□□ -0.6
TM2D3-208ENST00000559891 CLEC14AQ86T13 490 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 TMEM151AQ8N4L1 468 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 MOCOSQ96EN8 888 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 LINC00615Q96LM1 132 aaPredicted RBP11.32□□□□□ -0.6
TM2D3-208ENST00000559891 STN1Q9H668 368 aaKnown RBP11.32□□□□□ -0.6
TM2D3-208ENST00000559891 TBC1D29Q9UFV1 150 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 SLC7A8Q9UHI5 535 aa11.32□□□□□ -0.6
TM2D3-208ENST00000559891 NPEPPSL1A6NEC2 478 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 PRR19A6NJB7 356 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 KMOO15229 486 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 CD1DP15813 335 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 CRABP2P29373 138 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 STX3Q13277 289 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 CLCA4Q14CN2 919 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 OR4D1Q15615 310 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 RNF220Q5VTB9 566 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 PHC3Q8NDX5 983 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 SKA2Q8WVK7 121 aaPredicted RBP11.31□□□□□ -0.6
TM2D3-208ENST00000559891 THTPAQ9BU02 230 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 CCDC28BQ9BUN5 200 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 C20orf27Q9GZN8 174 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 FAM192AQ9GZU8 254 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 ZNF395Q9H8N7 513 aaPredicted RBP11.31□□□□□ -0.6
TM2D3-208ENST00000559891 LATS2Q9NRM7 1088 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 NDE1Q9NXR1 346 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 CPSF2Q9P2I0 782 aaKnown RBP11.31□□□□□ -0.6
TM2D3-208ENST00000559891 APOBEC3BQ9UH17 382 aaKnown RBP11.31□□□□□ -0.6
TM2D3-208ENST00000559891 TLK1Q9UKI8 766 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 DGKBQ9Y6T7 804 aa11.31□□□□□ -0.6
TM2D3-208ENST00000559891 ARID1BQ8NFD5 2236 aaPredicted RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 PRR5-ARHGAP8B1AHC4 643 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TNFRSF10CO14798 259 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 FKBP6O75344 327 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 CSF2P04141 144 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 KELP23276 732 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 CPOXP36551 454 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ACTR1BP42025 376 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 CTSKP43235 329 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 CLCNKAP51800 687 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 C21orf59P57076 290 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ACTR1AP61163 376 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 GRIK2Q13002 908 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 PTK2BQ14289 1009 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TSNQ15631 228 aaKnown RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 PHKG1Q16816 387 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TRIM61Q5EBN2 209 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 METRNLQ641Q3 311 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 AAGABQ6PD74 315 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 MBOAT1Q6ZNC8 495 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ISCA2Q86U28 154 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 IQCHQ86VS3 1027 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 OXR1Q8N573 874 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ZNF514Q96K75 400 aaPredicted RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 OR52A5Q9H2C5 316 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ALG9Q9H6U8 611 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 RXFP3Q9NSD7 469 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 UTP6Q9NYH9 597 aaKnown RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 MARCOQ9UEW3 520 aaPredicted RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 COMMD10Q9Y6G5 202 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 EP300Q09472 2414 aaPredicted RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 NEMP2A6NFY4 417 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TK2O00142 265 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 SLCO2B1O94956 709 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TNFP01375 233 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 KITP10721 976 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 NME1P15531 152 aaKnown RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TFEBP19484 476 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 MPLP40238 635 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ALDH18A1P54886 795 aaKnown RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 IL2P60568 153 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TUBB3Q13509 450 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 SYTL3Q4VX76 610 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 N4BP2L1Q5TBK1 243 aaPredicted RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 FOXB2Q5VYV0 432 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 FAM219BQ5XKK7 198 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ZC3H14Q6PJT7 736 aaKnown RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 IZUMO2Q6UXV1 221 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 C11orf74Q86VG3 221 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 GATAD2AQ86YP4 633 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 FSTL5Q8N475 847 aaPredicted RBP11.3□□□□□ -0.6
TM2D3-208ENST00000559891 SUMF1Q8NBK3 374 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ACMSDQ8TDX5 336 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 LMX1AQ8TE12 382 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ASZ1Q8WWH4 475 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 EXT2Q93063 718 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 TSPAN17Q96FV3 270 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 CLPTM1LQ96KA5 538 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 RILPQ96NA2 401 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 ECSITQ9BQ95 431 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 RAPGEFL1Q9UHV5 662 aa11.3□□□□□ -0.6
TM2D3-208ENST00000559891 GOLGA4Q13439 2230 aaKnown RBP11.29□□□□□ -0.6
TM2D3-208ENST00000559891 A0A088AWK7 358 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms