RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 MAP2K7O14733 419 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 MATN3O15232 486 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 SGTAO43765 313 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 KCNJ13O60928 360 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 MED26O95402 600 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 UQCRHP07919 91 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 CD48P09326 243 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 KLC1Q07866 573 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 GALNT2Q10471 571 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 ZBTB17Q13105 803 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 TFDP3Q5H9I0 405 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 ZNF766Q5HY98 468 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 CES4AQ5XG92 561 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 NT5DC3Q86UY8 548 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 PSTKQ8IV42 348 aaKnown RBP11.35□□□□□ -0.59
SMAD3-206ENST00000558739 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-206ENST00000558739 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 DDHD1Q8NEL9 900 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 RBM41Q96IZ5 413 aaKnown RBP11.35□□□□□ -0.59
SMAD3-206ENST00000558739 POLDIP3Q9BY77 421 aaKnown RBP11.35□□□□□ -0.59
SMAD3-206ENST00000558739 MAGEE1Q9HCI5 957 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 KLHL1Q9NR64 748 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 ICKQ9UPZ9 632 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 ASB1Q9Y576 335 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 HRH3Q9Y5N1 445 aa11.35□□□□□ -0.59
SMAD3-206ENST00000558739 MGAT4DA6NG13 374 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 TMEM191CA6NGB0 347 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 VSTM2BA6NLU5 285 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 TMCO5BA8MYB1 307 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 FOXO6A8MYZ6 492 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 KCNK1O00180 336 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 BUD23O43709 281 aaKnown RBP11.34□□□□□ -0.59
SMAD3-206ENST00000558739 HOXD4P09016 255 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-206ENST00000558739 DNASE1P24855 282 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 NDUFS1P28331 727 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 SERPINB6P35237 376 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 ZNF135P52742 658 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-206ENST00000558739 DGKQP52824 942 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 NCBP2-AS2Q69YL0 99 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 TLDC1Q6P9B6 456 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 AMIGO1Q86WK6 493 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 CCDC71Q8IV32 467 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-206ENST00000558739 ZZZ3Q8IYH5 903 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 DNAJC22Q8N4W6 341 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 CNTD1Q8N815 330 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 OR2L2Q8NH16 312 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 RMND5BQ96G75 393 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-206ENST00000558739 FRMD6Q96NE9 622 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 OR2A14Q96R47 310 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 FERD3LQ96RJ6 166 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 ADGRE3Q9BY15 652 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 RAD18Q9NS91 495 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 COQ3Q9NZJ6 369 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 ACSL5Q9ULC5 683 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 RNF6Q9Y252 685 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 COLEC10Q9Y6Z7 277 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
SMAD3-206ENST00000558739 PHF3Q92576 2039 aaKnown RBP11.33□□□□□ -0.6
SMAD3-206ENST00000558739 NSG1A0A0A6YYJ2 146 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 INAFM1C9JVW0 142 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 FFAR3O14843 346 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 GPR42O15529 346 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ONECUT2O95948 504 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ALBP02768 609 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 SERPINA7P05543 415 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 TPOP07202 933 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 RARAP10276 462 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 DESP17661 470 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 CES1P23141 567 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 PEBP1P30086 187 aaKnown RBP11.33□□□□□ -0.6
SMAD3-206ENST00000558739 AKT1P31749 480 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 NSG1P42857 185 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 DLX5P56178 289 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ALDH6A1Q02252 535 aaKnown RBP11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ZNF33BQ06732 778 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 PPP2R5EQ16537 467 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 SLC5A12Q1EHB4 618 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 RNFT1Q5M7Z0 435 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ATG9BQ674R7 924 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 FCRLBQ6BAA4 426 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ACAD10Q6JQN1 1059 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 MICALCLQ6ZW33 695 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 NLRP9Q7RTR0 991 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 PHC2Q8IXK0 858 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 CIARTQ8N365 385 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-206ENST00000558739 SIGLEC12Q96PQ1 595 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ZCCHC2Q9C0B9 1178 aaKnown RBP11.33□□□□□ -0.6
SMAD3-206ENST00000558739 RNF32Q9H0A6 362 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 CLEC4MQ9H2X3 399 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-206ENST00000558739 ANKRD10Q9NXR5 420 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 EURLQ9NYK6 297 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 C3orf18Q9UK00 162 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 L3MBTL1Q9Y468 752 aa11.33□□□□□ -0.6
SMAD3-206ENST00000558739 A0A0J9YY10 115 aa11.32□□□□□ -0.6
SMAD3-206ENST00000558739 FAM237BA0A1B0GVD1 139 aa11.32□□□□□ -0.6
SMAD3-206ENST00000558739 GOLGA6L4A6NEF3 574 aa11.32□□□□□ -0.6
SMAD3-206ENST00000558739 DSCR3O14972 297 aa11.32□□□□□ -0.6
SMAD3-206ENST00000558739 ASNA1O43681 348 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms