RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GZMAP12544 262 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 CCNCP24863 283 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 OTX2P32243 289 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ARCN1P48444 511 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 KPNA2P52292 529 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 CTSCP53634 463 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 DPYSL3Q14195 570 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 BECN1Q14457 450 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 NFE2L1Q14494 772 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 NCF4Q15080 339 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 PAFAH1B3Q15102 231 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 LLGL1Q15334 1064 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 IFI16Q16666 785 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 PTCHD3Q3KNS1 767 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ATP13A5Q4VNC0 1218 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF789Q5FWF6 425 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 RPS26P11Q5JNZ5 115 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 CCDC122Q5T0U0 273 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 TMTC4Q5T4D3 741 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 CCDC183Q5T5S1 534 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 LYPLAL1Q5VWZ2 237 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 E4F1Q66K89 784 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 MZT2BQ6NZ67 158 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 DUS1LQ6P1R4 473 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 IGFL3Q6UXB1 125 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 SPOCD1Q6ZMY3 1216 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 UNC5AQ6ZN44 842 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 APTXQ7Z2E3 356 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF571Q7Z3V5 609 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 TMC3Q7Z5M5 1100 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 CUZD1Q86UP6 607 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 AMZ2Q86W34 360 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 OOSP2Q86WS3 158 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 MCEMP1Q8IX19 187 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 Q8N3U1 123 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 GALNT16Q8N428 558 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ST6GALNAC3Q8NDV1 305 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 OR1L3Q8NH93 324 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 FAM71BQ8TC56 605 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 CCT6BQ92526 530 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 TSGA13Q96PP4 275 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 NUP62CLQ9H1M0 184 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 HAUS4Q9H6D7 363 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ZBTB20Q9HC78 741 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 RAD18Q9NS91 495 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 IMP3Q9NV31 184 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 PCMTD2Q9NV79 361 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 HAUS2Q9NVX0 235 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 HRASLS2Q9NWW9 162 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 NDOR1Q9UHB4 597 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 LIMA1Q9UHB6 759 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 GPN3Q9UHW5 284 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 BTRCQ9Y297 605 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF711Q9Y462 761 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 CFAP20Q9Y6A4 193 aaKnown RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 PIKFYVEQ9Y2I7 2098 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 LRRC10BA6NIK2 292 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SLC9B1P1A6NJY1 282 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 LRRC53A6NM62 1247 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 PRSS44E7EML9 344 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 KCNK1O00180 336 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 E2F3O00716 465 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 AURKAO14965 403 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 POP7O75817 140 aaKnown RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 KLF7O75840 302 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 MYBL1P10243 752 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 MTHFD1P11586 935 aaKnown RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 CYP2A7P20853 494 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 PBLDP30039 288 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 GJC1P36383 396 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 GLRBP48167 497 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ARSEP51690 589 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SLC7A5Q01650 507 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 GBE1Q04446 702 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 DMTNQ08495 405 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 DMPKQ09013 629 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 TMEM115Q12893 351 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SLC10A2Q12908 348 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ZBTB17Q13105 803 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 TRIM14Q14142 442 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 PIGHQ14442 188 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 MYBPC3Q14896 1274 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 PCSK7Q16549 785 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ANO6Q4KMQ2 910 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ATP13A4Q4VNC1 1196 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 DCAF10Q5QP82 559 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 SP5Q6BEB4 398 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ARMC6Q6NXE6 501 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 Q6ZS92 163 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 UBE2R2Q712K3 238 aaPredicted RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ZC3H18Q86VM9 953 aaKnown RBP5.67□□□□□ -1.5
VPS33B-207ENST00000557470 RAB43Q86YS6 212 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 CARFQ8N187 725 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 ZADH2Q8N4Q0 377 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 PQLC3Q8N755 202 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 NIPA2Q8N8Q9 360 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 RASGEF1AQ8N9B8 481 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 CLEC1AQ8NC01 280 aa5.67□□□□□ -1.5
VPS33B-207ENST00000557470 CCNYQ8ND76 341 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms