RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 POLBP06746 335 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 SLC35G4P0C7Q5 338 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 MLNP12872 115 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 POLR2CP19387 275 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 PRLHRP49683 370 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 CDKN1CP49918 316 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ZNF789Q5FWF6 425 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 PLEKHS1Q5SXH7 462 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 CYB5D1Q6P9G0 228 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 KLHL35Q6PF15 583 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 PRUNE1Q86TP1 453 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 CCDC25Q86WR0 208 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 OOSP2Q86WS3 158 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 TEX19Q8NA77 164 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 CCDC110Q8TBZ0 833 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ADAMTS17Q8TE56 1095 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 LINC00615Q96LM1 132 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 GPR87Q9BY21 358 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ROPN1BQ9BZX4 212 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 CHST8Q9H2A9 424 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 CDC42EP4Q9H3Q1 356 aaKnown RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 FAM96AQ9H5X1 160 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ASB8Q9H765 288 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 PPCSQ9HAB8 311 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ROPN1Q9HAT0 212 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ETNK1Q9HBU6 452 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 POMT2Q9UKY4 750 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 ACSL5Q9ULC5 683 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 NFS1Q9Y697 457 aa10.27□□□□□ -0.77
SHMT2-215ENST00000554656 TEX15Q9BXT5 2789 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 PCM1Q15154 2024 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 NUP210LQ5VU65 1888 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 IGLV3-16A0A075B6K0 115 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 SLC9B1P1A6NJY1 282 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 GOLGA8KD6RF30 607 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 SCRG1O75711 98 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 ANXA9O76027 345 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 TMEM63AO94886 807 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 CAPN1P07384 714 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 GSTA2P09210 222 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 PRSS56P0CW18 603 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 ST6GAL1P15907 406 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 RORAP35398 523 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 MAGEA3P43357 314 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 MAGEA4P43358 317 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 ESPL1Q14674 2120 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 DNAJC21Q5F1R6 531 aaKnown RBP10.26□□□□□ -0.77
SHMT2-215ENST00000554656 ANKRD22Q5VYY1 191 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 ARMC3Q5W041 872 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 FAM198BQ6UWH4 519 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 SYVN1Q86TM6 617 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 BPHLQ86WA6 291 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-215ENST00000554656 TMEM126BQ8IUX1 230 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 DSELQ8IZU8 1212 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 CNPY4Q8N129 248 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 NXPE1Q8N323 547 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 OR4E2Q8NGC2 313 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 OR1L3Q8NH93 324 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 HM13Q8TCT9 377 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 ZFPM2Q8WW38 1151 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 MR1Q95460 341 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 PSMG3-AS1Q96PY0 264 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 OR52A5Q9H2C5 316 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 EPB41L4BQ9H329 900 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 MLXIPLQ9NP71 852 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 LATS2Q9NRM7 1088 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 NINJ2Q9NZG7 142 aa10.26□□□□□ -0.77
SHMT2-215ENST00000554656 FARSAQ9Y285 508 aaKnown RBP10.26□□□□□ -0.77
SHMT2-215ENST00000554656 NBPF19A0A087WUL8 3843 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 TRBV5-4A0A0C4DH59 114 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 BLACEA4D250 179 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 GOLGA6L10A6NI86 522 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 ARGFXA6NJG6 315 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 C2orf81A6NN90 581 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 E7EVH7 732 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 AGPSO00116 658 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 BTN3A3O00478 584 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 BTN3A1O00481 513 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 LDB2O43679 373 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 SUN1O94901 812 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 METTL18O95568 372 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 GP1BBP13224 206 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 PVRP15151 417 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 PDHA2P29803 388 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 LMAN1P49257 510 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 ARL4DP49703 201 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 TMPRSS15P98073 1019 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 SPARCL1Q14515 664 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 PRPSAP1Q14558 356 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 NADK2Q4G0N4 442 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 CCDC38Q502W7 563 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 AGBL2Q5U5Z8 902 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 HIST2H2BCQ6DN03 193 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 CFAP206Q8IYR0 622 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 CARFQ8N187 725 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 FAM26EQ8N5C1 309 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 ENDOVQ8N8Q3 282 aaKnown RBP10.25□□□□□ -0.77
SHMT2-215ENST00000554656 ACVR1CQ8NER5 493 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 OR8K5Q8NH50 307 aa10.25□□□□□ -0.77
SHMT2-215ENST00000554656 THAP4Q8WY91 577 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms