RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 C2P06681 752 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ERGP11308 486 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ENO3P13929 434 aaPredicted RBP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 CD1DP15813 335 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 TYRP1P17643 537 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ALDH4A1P30038 563 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 PKLRP30613 574 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 HPDP32754 393 aaPredicted RBP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ID4P47928 161 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 LSSP48449 732 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 DUSP3P51452 185 aaPredicted RBP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 SLC18A1P54219 525 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 GFERP55789 205 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ILKQ13418 452 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 PUM1Q14671 1186 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 OR4D1Q15615 310 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 MBOAT1Q6ZNC8 495 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 RAB44Q7Z6P3 723 aaPredicted RBP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 CLEC14AQ86T13 490 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 SRRM1Q8IYB3 904 aaKnown RBP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 LRRC56Q8IYG6 542 aaPredicted RBP12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ADGRF3Q8IZF5 1079 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ACMSDQ8TDX5 336 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ZFPM2Q8WW38 1151 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 PKP4Q99569 1192 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 SEMA6CQ9H3T2 930 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 MVB12BQ9H7P6 319 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 GPAMQ9HCL2 828 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 KCNK9Q9NPC2 374 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 ZNF358Q9NW07 568 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 SPHK1Q9NYA1 384 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 PDE10AQ9Y233 779 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 KIF26BQ2KJY2 2108 aa12.61□□□□□ -0.39
CCDC42-202ENST00000539522 A0A1W2PPV9 198 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 PMS2P1A4D2B8 440 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 NPEPPSL1A6NEC2 478 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 BTN3A1O00481 513 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 ZBTB14O43829 449 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 UBXN7O94888 489 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 CCDC166P0CW27 439 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 STMN1P16949 149 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 KRT4P19013 534 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 SDHBP21912 280 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 MPSTP25325 297 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 EPHA4P54764 986 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 IL2P60568 153 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 YBX1P67809 324 aaKnown RBP12.6□□□□□ -0.39
CCDC42-202ENST00000539522 SLC18A2Q05940 514 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 FASTKQ14296 549 aaKnown RBP12.6□□□□□ -0.39
CCDC42-202ENST00000539522 TTLL9Q3SXZ7 439 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 AMZ1Q400G9 498 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 UGT3A1Q6NUS8 523 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 USP53Q70EK8 1073 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 SLITRK4Q8IW52 837 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 DCUN1D3Q8IWE4 304 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 TRIM48Q8IWZ4 208 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 RBM12BQ8IXT5 1001 aaKnown RBP12.6□□□□□ -0.39
CCDC42-202ENST00000539522 TMEM151AQ8N4L1 468 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 FBXO15Q8NCQ5 510 aaPredicted RBP12.6□□□□□ -0.39
CCDC42-202ENST00000539522 OR4E2Q8NGC2 313 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 ADAMTS14Q8WXS8 1223 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 SLC38A3Q99624 504 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 TRIT1Q9H3H1 467 aaKnown RBP12.6□□□□□ -0.39
CCDC42-202ENST00000539522 EVA1BQ9NVM1 165 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 KCNK4Q9NYG8 393 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 ADAM21Q9UKJ8 722 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 HEBP2Q9Y5Z4 205 aa12.6□□□□□ -0.39
CCDC42-202ENST00000539522 FRYQ5TBA9 3013 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 ZFHX4Q86UP3 3567 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 A0A096LPK6 155 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 OR5K3A6NET4 321 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 D6RAR5 112 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 PRPF4O43172 522 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC42-202ENST00000539522 KIF1CO43896 1103 aaKnown RBP12.59□□□□□ -0.39
CCDC42-202ENST00000539522 C9P02748 559 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 PROS1P07225 676 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 SBK3P0C264 359 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 CAPZBP47756 277 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 ZFP36L1Q07352 338 aaKnown RBP12.59□□□□□ -0.39
CCDC42-202ENST00000539522 TSNQ15631 228 aaKnown RBP12.59□□□□□ -0.39
CCDC42-202ENST00000539522 UBE2R2Q712K3 238 aaPredicted RBP12.59□□□□□ -0.39
CCDC42-202ENST00000539522 ISCA2Q86U28 154 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 CHCHD4Q8N4Q1 142 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 KCTD4Q8WVF5 259 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 NXNL1Q96CM4 212 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 SLC12A9Q9BXP2 914 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 DERL2Q9GZP9 239 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 ABCG4Q9H172 646 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 TDRKHQ9Y2W6 561 aaKnown RBP12.59□□□□□ -0.39
CCDC42-202ENST00000539522 COLEC10Q9Y6Z7 277 aa12.59□□□□□ -0.39
CCDC42-202ENST00000539522 MN1Q10571 1320 aaPredicted RBP12.59□□□□□ -0.39
CCDC42-202ENST00000539522 FREM2Q5SZK8 3169 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 IGHV5-10-1A0A0J9YXX1 117 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 FAM149AA5PLN7 773 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 OR6C74A6NCV1 312 aa12.58□□□□□ -0.4
CCDC42-202ENST00000539522 SLC16A8O95907 504 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms