RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 C17orf53Q8N3J3 647 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 NME8Q8N427 588 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 METTL27Q8N6F8 245 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PRR26Q8N8Z3 221 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ARRDC2Q8TBH0 407 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 CREB3L4Q8TEY5 395 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 SDR42E1Q8WUS8 393 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 OIT3Q8WWZ8 545 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ADAMTS14Q8WXS8 1223 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 WASF1Q92558 559 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ERLEC1Q96DZ1 483 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 DYNLL2Q96FJ2 89 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ACOX2Q99424 681 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 BARD1Q99728 777 aaKnown RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 S1PR5Q9H228 398 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 EBF3Q9H4W6 596 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 EPB41L5Q9HCM4 733 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PIH1D3Q9NQM4 214 aaKnown RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 MRPL15Q9P015 296 aaKnown RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ABI3Q9P2A4 366 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 SUCLA2Q9P2R7 463 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 BARX2Q9UMQ3 279 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 DUSP12Q9UNI6 340 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 PPIEQ9UNP9 301 aaKnown RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 R3HDM2Q9Y2K5 976 aaKnown RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ADAM18Q9Y3Q7 739 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 CMAHPQ9Y471 501 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 SNX9Q9Y5X1 595 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 ZFP37Q9Y6Q3 630 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-202ENST00000535689 CEP250Q9BV73 2442 aa3.24□□□□□ -1.89
SNHG1-202ENST00000535689 MYH9P35579 1960 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 DOCK8Q8NF50 2099 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 hCG_1807616A0A1W2PRN6 198 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 ANKRD66B4E2M5 251 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 M0QZ24 198 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 SLC30A4O14863 429 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 SMAD9O15198 467 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TGFB1I1O43294 461 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 FIBPO43427 364 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 DOK2O60496 412 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CSPG5O95196 566 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 PDGFBP01127 241 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TPOP07202 933 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 ZFYP08048 801 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 HSPD1P10809 573 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 VPREB1P12018 145 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 MCCP23508 829 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 PON1P27169 355 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CALML3P27482 149 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 BDKRB2P30411 391 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 NNMTP40261 264 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CXCR3P49682 368 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 NT5C2P49902 561 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 MFAP4P55083 255 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 MLLT10P55197 1068 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 HNRNPH2P55795 449 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 RPS6P62753 249 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 GRSF1Q12849 480 aaKnown RBP eCLIP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 GAGE2BQ13066 116 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 SMC1AQ14683 1233 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 SLC39A14Q15043 492 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 KIF19Q2TAC6 998 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 GAGE2EQ4V326 116 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TMEM35AQ53FP2 167 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 XKR9Q5GH70 373 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CXorf66Q5JRM2 361 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 RARS2Q5T160 578 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 ARHGEF16Q5VV41 709 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 AWAT2Q6E213 333 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 DHRS7BQ6IAN0 325 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 GAGE2AQ6NT46 116 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 SLC36A4Q6YBV0 504 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF704Q6ZNC4 412 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 C15orf39Q6ZRI6 1047 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TPRG1Q6ZUI0 275 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CREB3L2Q70SY1 520 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 MTSS1LQ765P7 747 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 RNF113BQ8IZP6 322 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 EMC1Q8N766 993 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 POC5Q8NA72 575 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 SUMF1Q8NBK3 374 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 APPL2Q8NEU8 664 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TSPAN14Q8NG11 270 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 OR8K5Q8NH50 307 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 OR14L1PQ8NHC6 308 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TRPC4APQ8TEL6 797 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 IGFBPL1Q8WX77 278 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 MRPS27Q92552 414 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TAAR8Q969N4 342 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 ZNF48Q96MX3 618 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 TTC14Q96N46 770 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 KLHL5Q96PQ7 755 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 KIFC3Q9BVG8 833 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CHMP4BQ9H444 224 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 PPP1R3EQ9H7J1 279 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 ARHGEF38Q9NXL2 777 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 MARCH4Q9P2E8 410 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CPSF2Q9P2I0 782 aaKnown RBP3.23□□□□□ -1.89
SNHG1-202ENST00000535689 GAGE2DQ9UEU5 116 aa3.23□□□□□ -1.89
SNHG1-202ENST00000535689 CNOT8Q9UFF9 292 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms