RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 MANEALQ5VSG8 457 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SEL1L3Q68CR1 1132 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 LRRC66Q68CR7 880 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ACAD10Q6JQN1 1059 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CRTC1Q6UUV9 634 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SUSD1Q6UWL2 747 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SCARA5Q6ZMJ2 495 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CCDC149Q6ZUS6 474 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ENOSF1Q7L5Y1 443 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RAB11FIP2Q7L804 512 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MAMDC2Q7Z304 686 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 GPR155Q7Z3F1 870 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 BMP8AQ7Z5Y6 402 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ASPGQ86U10 573 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SLC9B2Q86UD5 537 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RNF113BQ8IZP6 322 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 KRT78Q8N1N4 520 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RNF148Q8N7C7 305 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TTLL6Q8N841 843 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ZBTB38Q8NAP3 1195 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 PAPD5Q8NDF8 572 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 CHDHQ8NE62 594 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 GPR156Q8NFN8 814 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 OR1M1Q8NGA1 313 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RNASE11Q8TAA1 199 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 SLC20A1Q8WUM9 679 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CANT1Q8WVQ1 401 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ASB15Q8WXK1 588 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CPT1BQ92523 772 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 NSMAFQ92636 917 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 NELL1Q92832 810 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SLC38A4Q969I6 547 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MYLPFQ96A32 169 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ISL2Q96A47 359 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TRIM43Q96BQ3 446 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 ARMC5Q96C12 935 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ROPN1LQ96C74 230 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 REPS1Q96D71 796 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 KLHDC7BQ96G42 594 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MRPL48Q96GC5 212 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 MYRFLQ96LU7 910 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RNF145Q96MT1 663 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MUS81Q96NY9 551 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 OR5M11Q96RB7 305 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ACO2Q99798 780 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 WDR83Q9BRX9 315 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 HERPUD2Q9BSE4 406 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 FEM1AQ9BSK4 669 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 NAT9Q9BTE0 207 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PDCD10Q9BUL8 212 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ZNF518BQ9C0D4 1074 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 CHRDQ9H2X0 955 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 PIGUQ9H490 435 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TOR3AQ9H497 397 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TFB2MQ9H5Q4 396 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 ASB7Q9H672 318 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MKNK2Q9HBH9 465 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 C3orf14Q9HBI5 128 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 STARD7Q9NQZ5 370 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ZNF275Q9NSD4 429 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 TMLHEQ9NVH6 421 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RAB20Q9NX57 234 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MTMR4Q9NYA4 1195 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 RDH8Q9NYR8 311 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 COPZ2Q9P299 210 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 EVLQ9UI08 416 aaPredicted RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 PHF11Q9UIL8 331 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ANAPC7Q9UJX3 599 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 VAV3Q9UKW4 847 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 INTS6Q9UL03 887 aaKnown RBP5.7□□□□□ -1.5
CD44-225ENST00000527326 STAP1Q9ULZ2 295 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SNX6Q9UNH7 406 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ING4Q9UNL4 249 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 NIP7Q9Y221 180 aaKnown RBP eCLIP5.7□□□□□ -1.5
CD44-225ENST00000527326 CDYLQ9Y232 598 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 ANKRD6Q9Y2G4 727 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 MED16Q9Y2X0 877 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 TPRKBQ9Y3C4 175 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 SLC22A7Q9Y694 548 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 UTRNP46939 3433 aa5.7□□□□□ -1.5
CD44-225ENST00000527326 DOCK2Q92608 1830 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CIB4A0PJX0 185 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PIPSLA2A3N6 862 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 TMEM191CA6NGB0 347 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 ZNF729A6NN14 1252 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 BBIP1A8MTZ0 92 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 KBTBD13C9JR72 458 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 K7ENM7 598 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SGK1O00141 431 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SLC1A7O00341 560 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 MYL12BO14950 172 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SYN3O14994 580 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 KIAA0355O15063 1070 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 OGTO15294 1046 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 PRPSAP2O60256 369 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CST8O60676 142 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 CRTAPO75718 401 aaPredicted RBP5.69□□□□□ -1.5
CD44-225ENST00000527326 CYP7B1O75881 506 aa5.69□□□□□ -1.5
CD44-225ENST00000527326 SLITRK3O94933 977 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms