RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ERVK-18Q9QC07 812 aa16.2■□□□□ 0.18
PCDHGA11-202ENST00000518882 MTRRQ9UBK8 725 aa16.2■□□□□ 0.18
PCDHGA11-202ENST00000518882 OPTCQ9UBM4 332 aa16.2■□□□□ 0.18
PCDHGA11-202ENST00000518882 PAIP2BQ9ULR5 123 aaKnown RBP16.2■□□□□ 0.18
PCDHGA11-202ENST00000518882 FAM220BPB1ANY3 271 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 SLC28A1O00337 649 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 GABARAPO95166 117 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 BCKDHAP12694 445 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 CYP4B1P13584 511 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 FMO3P31513 532 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 HPCAL1P37235 193 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 MAP2K4P45985 399 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 IFITM3Q01628 133 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 MAD2L1Q13257 205 aaPredicted RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZNF846Q147U1 533 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 OXA1LQ15070 435 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 TRIM16LQ309B1 348 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ADPRMQ3LIE5 342 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 PERM1Q5SV97 790 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 CACHD1Q5VU97 1274 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 FKBP9P1Q75LS8 142 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZNF551Q7Z340 670 aaPredicted RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 SLCO6A1Q86UG4 719 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 CARNMT1Q8N4J0 409 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 MCOLN3Q8TDD5 553 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 TAMM41Q96BW9 452 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 SH3GL1Q99961 368 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 RHNO1Q9BSD3 238 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ALOXE3Q9BYJ1 711 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 NACA2Q9H009 215 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 TRIT1Q9H3H1 467 aaKnown RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 LHX3Q9UBR4 397 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 DAPK2Q9UIK4 370 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 KRBA1A5PL33 1030 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 H0Y626 953 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 MANBAO00462 879 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 FZD6O60353 706 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 SLC25A14O95258 325 aaPredicted RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 TRIM16O95361 564 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 PRAMEF1O95521 474 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ANGPTL1O95841 491 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 CCDC159P0C7I6 412 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ACVR2AP27037 513 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 CORO1AP31146 461 aaKnown RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 HMGCLP35914 325 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 LSM3P62310 102 aaKnown RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 CARD16Q5EG05 197 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 RTP2Q5QGT7 225 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ATXN7L2Q5T6C5 722 aaPredicted RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ATG9BQ674R7 924 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 B3GNT8Q7Z7M8 397 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 RNF168Q8IYW5 571 aaPredicted RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZNF566Q969W8 418 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 FAM120BQ96EK7 910 aaKnown RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 TMEM165Q9HC07 324 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 C1orf109Q9NX04 203 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 INTS6Q9UL03 887 aaKnown RBP16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 DLGAP4Q9Y2H0 992 aa16.19■□□□□ 0.18
PCDHGA11-202ENST00000518882 TMEM247A6NEH6 219 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 COCHO43405 550 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 FUT4P22083 530 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 PTPN6P29350 595 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 CDKN2CP42773 168 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 MTA1Q13330 715 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 SLC14A1Q13336 389 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 CPZQ66K79 652 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 CEP68Q76N32 757 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 PYURFQ96I23 114 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 MROQ9BYG7 248 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 ACPTQ9BZG2 426 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 MAGEE1Q9HCI5 957 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 FCF1Q9Y324 198 aaKnown RBP16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 PCDHGB1Q9Y5G3 927 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 PMF1-BGLAPU3KQ54 211 aa16.18■□□□□ 0.18
PCDHGA11-202ENST00000518882 A0A1B0GVM2 712 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 JRKO75564 520 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 DNAJB5O75953 348 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 STC2O76061 302 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 IRF1P10914 325 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ITGAMP11215 1152 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZNF7P17097 686 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 HOXB9P17482 250 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 IGFBP5P24593 272 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 MZF1P28698 734 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 GATMP50440 423 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 OCA2Q04671 838 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 SIM2Q14190 667 aaPredicted RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 SMU1Q2TAY7 513 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 HIPK1Q86Z02 1210 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 GALNT13Q8IUC8 556 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 CHCHD4Q8N4Q1 142 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 USP7Q93009 1102 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 NTMT1Q9BV86 223 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 HMG20AQ9NP66 347 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 MARCH5Q9NX47 278 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ASIC5Q9NY37 505 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ABCG2Q9UNQ0 655 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 PCDHGA10Q9Y5H3 936 aa16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 ZNF106Q9H2Y7 1883 aaKnown RBP16.17■□□□□ 0.18
PCDHGA11-202ENST00000518882 NT5C1B-RDH14C9J2C7 533 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms