RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 ALG9Q9H6U8 611 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 ZNF358Q9NW07 568 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 NUDT4Q9NZJ9 180 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 TMEM216Q9P0N5 145 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 MID2Q9UJV3 735 aa11.65□□□□□ -0.54
PDLIM5-220ENST00000514830 LY6G6EA0A0G2JKS1 128 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 EME2A4GXA9 379 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 FFAR2O15552 330 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 SIGLEC6O43699 453 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 PLIN3O60664 434 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 ZWINTO95229 277 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 TOP3BO95985 862 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 VIPP01282 170 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 HIST1H2AGP0C0S8 130 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 TPBGLP0DKB5 382 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 CKMT1AP12532 417 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 CREB1P16220 341 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 GLB1P16278 677 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 HIST1H2ADP20671 130 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 GGT5P36269 586 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 ETV4P43268 484 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 GPR3P46089 330 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 KCNC1P48547 511 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 EPHA4P54764 986 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 NFKB2Q00653 900 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 HHEXQ03014 270 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 CYP2A13Q16696 494 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 AASDHQ4L235 1098 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 N4BP2L1Q5TBK1 243 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 TMEM26Q6ZUK4 368 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 GPSM1Q86YR5 675 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 SPATA6LQ8N4H0 392 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 KYQ8NBH2 561 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 OR9A1PQ8NGU1 263 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 BAHD1Q8TBE0 780 aaPredicted RBP11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 PATE1Q8WXA2 126 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 ATL1Q8WXF7 558 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 FBXL8Q96CD0 374 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 HIST1H2AHQ96KK5 128 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 APOLD1Q96LR9 279 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 FERD3LQ96RJ6 166 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 HIST1H2AJQ99878 128 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 H2AFJQ9BTM1 129 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 EPB41L1Q9H4G0 881 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 XPR1Q9UBH6 696 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 RNF112Q9ULX5 631 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 U3KQA8 63 aa11.64□□□□□ -0.55
PDLIM5-220ENST00000514830 DCDC2BA2VCK2 349 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 ZNF839A8K0R7 811 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 ANXA5P08758 320 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 DHRS4L1P0CG22 281 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 SHMT2P34897 504 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 GLRBP48167 497 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 RAB28P51157 221 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 DUSP3P51452 185 aaPredicted RBP11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 SQSTM1Q13501 440 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 GPR18Q14330 331 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 NR0B2Q15466 257 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 TCEA2Q15560 299 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 HSP90B2PQ58FF3 399 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 ANKS6Q68DC2 871 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 DUS1LQ6P1R4 473 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 FRA10AC1Q70Z53 315 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 SFTPA2Q8IWL1 248 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 RAB42Q8N4Z0 105 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 EID2Q8N6I1 236 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 OR52E1Q8NGJ3 308 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 CFAP61Q8NHU2 1237 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 TCP10LQ8TDR4 215 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 DENND1AQ8TEH3 1009 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 UBTD2Q8WUN7 234 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 NAT6Q93015 286 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 RHBDF1Q96CC6 855 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 CCDC126Q96EE4 140 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 C1QTNF3Q9BXJ4 246 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 IQCGQ9H095 443 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 RXFP3Q9NSD7 469 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 OR6C2Q9NZP2 312 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 PTBP2Q9UKA9 531 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 PADI4Q9UM07 663 aa11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 CFAP20Q9Y6A4 193 aaKnown RBP11.63□□□□□ -0.55
PDLIM5-220ENST00000514830 RP1P56715 2156 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ASXL3Q9C0F0 2248 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 PABPN1LA6NDY0 278 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 STX16-NPEPL1H3BU86 382 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 TK2O00142 265 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 STX16O14662 325 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 PPM1DO15297 605 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ZW10O43264 779 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 SPAG7O75391 227 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 IPO13O94829 963 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 SLC16A8O95907 504 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 GP1BAP07359 652 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ADRB1P08588 477 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 TAC1P20366 129 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms