RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 KIRREL3Q8IZU9 778 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 GALNT11Q8NCW6 608 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 ACVR1CQ8NER5 493 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 RHEBL1Q8TAI7 183 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 PMEPA1Q969W9 287 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 CCDC126Q96EE4 140 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 TSNARE1Q96NA8 513 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 KLHL32Q96NJ5 620 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 BIRC8Q96P09 236 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 MRPL57Q9BQC6 102 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SLC13A1Q9BZW2 595 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 MRPL46Q9H2W6 279 aaKnown RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SUDS3Q9H7L9 328 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 NMRAL1Q9HBL8 299 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SYTL2Q9HCH5 934 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 IL26Q9NPH9 171 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 FBXO6Q9NRD1 293 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 TAS2R13Q9NYV9 303 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 PKD2L2Q9NZM6 624 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 B4GALT6Q9UBX8 382 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 HAO1Q9UJM8 370 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 MED16Q9Y2X0 877 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 SLC30A1Q9Y6M5 507 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 RNF215Q9Y6U7 377 aa10.26□□□□□ -0.77
PDLIM5-217ENST00000512274 TNRC6AQ8NDV7 1962 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 GLYATL1P3A0A0U1RQE8 302 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 CCDC78A2IDD5 438 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 WIPF3A6NGB9 483 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 TCP11X1B4DZS4 312 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 AP1G1O43747 822 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 NDUFS3O75489 264 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 CLDN7O95471 211 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 PRAMEF1O95521 474 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 SERPINE1P05121 402 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 PYGLP06737 847 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ALPIP09923 528 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 LTA4HP09960 611 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 PKMP14618 531 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 TIMP2P16035 220 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF37AP17032 561 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF7P17097 686 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ACRV1P26436 265 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 UGT1A3P35503 534 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 HK2P52789 917 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 THOP1P52888 689 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 DNAJB13P59910 316 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ATP6V0D1P61421 351 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 TIAL1Q01085 375 aaKnown RBP eCLIP10.25□□□□□ -0.774e-8■■■■□ 22.5
PDLIM5-217ENST00000512274 OCRLQ01968 901 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 CCDC15Q0P6D6 951 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 GALNT1Q10472 559 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ASPHQ12797 758 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 RALGDSQ12967 914 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 PCLAFQ15004 111 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 AGERQ15109 404 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 EIF2S3LQ2VIR3 472 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF789Q5FWF6 425 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 SPDYAQ5MJ70 313 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 RBM20Q5T481 1227 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 LRRC66Q68CR7 880 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 TTC19Q6DKK2 380 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 UGT3A1Q6NUS8 523 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ZNF549Q6P9A3 640 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 MACC1Q6ZN28 852 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ERN2Q76MJ5 926 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 CPLX4Q7Z7G2 160 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 TBC1D1Q86TI0 1168 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 NUDCD3Q8IVD9 361 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 CEP97Q8IW35 865 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 PIANPQ8IYJ0 282 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 NKAPQ8N5F7 415 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ARL10Q8N8L6 244 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ARMC2Q8NEN0 867 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 GDAP1Q8TB36 358 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 CPT1CQ8TCG5 803 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 MGARPQ8TDB4 240 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 APOBEC4Q8WW27 367 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 ELMO2Q96JJ3 720 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 VPS35Q96QK1 796 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 OLFM1Q99784 485 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 PITPNM3Q9BZ71 974 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 DERL2Q9GZP9 239 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 SEMA6CQ9H3T2 930 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 PRDM8Q9NQV8 689 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 THAP1Q9NVV9 213 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 CUEDC1Q9NWM3 386 aaPredicted RBP10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 TMEM216Q9P0N5 145 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 GPR34Q9UPC5 381 aa10.25□□□□□ -0.77
PDLIM5-217ENST00000512274 FBN2P35556 2912 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 OR51F1A6NGY5 319 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 C16orf96A6NNT2 1141 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 TMEM114B3SHH9 223 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 F8W8V4 182 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 G3V2L1 256 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 QSOX1O00391 747 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 DDAH2O95865 285 aa10.24□□□□□ -0.77
PDLIM5-217ENST00000512274 CPA3P15088 417 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms