RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 DCP2Q8IU60 420 aaKnown RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TRAPPC5Q8IUR0 188 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TBC1D3Q8IZP1 549 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 BEND7Q8N7W2 519 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 OR56A4Q8NGH8 313 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 FBXL8Q96CD0 374 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 TOE1Q96GM8 510 aaKnown RBP8.89□□□□□ -0.99
NR1I3-228ENST00000511676 HIST1H2AHQ96KK5 128 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 ZNF382Q96SR6 550 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 HIST1H2AJQ99878 128 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 H2AFJQ9BTM1 129 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 C20orf27Q9GZN8 174 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 MIR1-1HGQ9H1L0 117 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 OR2AG1Q9H205 316 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 GAREM1Q9H706 876 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 COG4Q9H9E3 785 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 NPHS2Q9NP85 383 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 CD274Q9NZQ7 290 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PCTPQ9UKL6 214 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 ACSL5Q9ULC5 683 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 DNAJC16Q9Y2G8 782 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PCDHGA10Q9Y5H3 936 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PCDHGA1Q9Y5H4 931 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 PI4KAP42356 2102 aa8.89□□□□□ -0.99
NR1I3-228ENST00000511676 CACNA1GO43497 2377 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 GOLGA8QA0A0J9YX86 632 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 SPAARA0A1B0GVQ0 90 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 GOLGA8OA6NCC3 632 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 NEMP2A6NFY4 417 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PRR19A6NJB7 356 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 OR2AG2A6NM03 316 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 GOLGA8NF8WBI6 632 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 H3BM21 787 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 E2F3O00716 465 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ITM2AO43736 263 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 SH3BP5O60239 455 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PCDHGA12O60330 932 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CCDC22O60826 627 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 VPS4BO75351 444 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 MTX2O75431 263 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 KIAA0754O94854 1291 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 SUPT7LO94864 414 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ESRRBO95718 433 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PAK4O96013 591 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 OTCP00480 354 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ENO1P06733 434 aaKnown RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CD59P13987 128 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ZNF8P17098 575 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 HTR1BP28222 390 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 EEF1DP29692 281 aaKnown RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ADSLP30566 484 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ARRB2P32121 409 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 HSD17B2P37059 387 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 RABIFP47224 123 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 RPIAP49247 311 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 HK3P52790 923 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PFN3P60673 137 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PPARDQ03181 441 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CLCQ05315 142 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 GRIK2Q13002 908 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ILKQ13418 452 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 UNC50Q53HI1 259 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 C10orf62Q5T681 223 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 KIAA0895LQ68EN5 471 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 DBX2Q6ZNG2 339 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 UBE2R2Q712K3 238 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ZNF771Q7L3S4 317 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 DET1Q7L5Y6 550 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 TRPM8Q7Z2W7 1104 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ABI3BPQ7Z7G0 1075 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PDZD3Q86UT5 571 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 IQCHQ86VS3 1027 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 AMZ2Q86W34 360 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 ZNF547Q8IVP9 402 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 LSMEM2Q8N112 164 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PELI3Q8N2H9 469 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CCNYL1Q8N7R7 359 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 TMEM145Q8NBT3 493 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PLA2G15Q8NCC3 412 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 FAM136AQ96C01 138 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 RHBDF1Q96CC6 855 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 PHF21BQ96EK2 531 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 MAELQ96JY0 434 aaKnown RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CCDC138Q96M89 665 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 LRRC37BQ96QE4 947 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 TUBB6Q9BUF5 446 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CCDC28BQ9BUN5 200 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 APOOQ9BUR5 198 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 GPR174Q9BXC1 333 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 TMEM120AQ9BXJ8 343 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CD244Q9BZW8 370 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 KCNK13Q9HB14 408 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 MBNL1Q9NR56 388 aaKnown RBP8.88□□□□□ -0.99
NR1I3-228ENST00000511676 TRIM33Q9UPN9 1127 aa8.88□□□□□ -0.99
NR1I3-228ENST00000511676 CCT8L1PA6NM43 557 aa8.87□□□□□ -0.99
NR1I3-228ENST00000511676 ZNF839A8K0R7 811 aa8.87□□□□□ -0.99
NR1I3-228ENST00000511676 K7EPI3 171 aa8.87□□□□□ -0.99
NR1I3-228ENST00000511676 MYO1CO00159 1063 aa8.87□□□□□ -0.99
NR1I3-228ENST00000511676 ZNF195O14628 629 aa8.87□□□□□ -0.99
NR1I3-228ENST00000511676 HGSO14964 777 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms