RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SPACA9Q96E40 222 aaPredicted RBP3.34□□□□□ -1.87
CD46-218ENST00000496723 ZNF599Q96NL3 588 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 FNBP1Q96RU3 617 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 MRPL1Q9BYD6 325 aaKnown RBP3.34□□□□□ -1.87
CD46-218ENST00000496723 OPA3Q9H6K4 179 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 SERINC1Q9NRX5 453 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 CACNG4Q9UBN1 327 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 DAPK2Q9UIK4 370 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 RPS6KA6Q9UK32 745 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 PPIEQ9UNP9 301 aaKnown RBP3.34□□□□□ -1.87
CD46-218ENST00000496723 SNX8Q9Y5X2 465 aa3.34□□□□□ -1.87
CD46-218ENST00000496723 FEZF1A0PJY2 475 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 ANKRD61A6NGH8 418 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 TCERG1O14776 1098 aaKnown RBP3.33□□□□□ -1.88
CD46-218ENST00000496723 ARHGEF9O43307 516 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 TOMM70O94826 608 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 PGM3O95394 542 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 CEBPBP17676 345 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 CA6P23280 308 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 CLK1P49759 484 aaKnown RBP3.33□□□□□ -1.88
CD46-218ENST00000496723 TEAD2Q15562 447 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 ITPRIPL2Q3MIP1 535 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 ELFN2Q5R3F8 820 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 Q6ZSR9 355 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 CDK20Q8IZL9 346 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 OR10S1Q8NGN2 331 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 OR2T6Q8NHC8 308 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 NXNL1Q96CM4 212 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 GCNAQ96QF7 691 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 ABHD1Q96SE0 405 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 OPRPNQ99935 248 aaPredicted RBP3.33□□□□□ -1.88
CD46-218ENST00000496723 WNT5BQ9H1J7 359 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 GOLPH3LQ9H4A5 285 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 ERVMER34-1Q9H9K5 563 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 EQTNQ9NQ60 294 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 ZDHHC18Q9NUE0 388 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 PLCXD1Q9NUJ7 323 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 DPP3Q9NY33 737 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 GDE1Q9NZC3 331 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 TMEM181Q9P2C4 612 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 KLHL8Q9P2G9 620 aaPredicted RBP3.33□□□□□ -1.88
CD46-218ENST00000496723 CPSF2Q9P2I0 782 aaKnown RBP3.33□□□□□ -1.88
CD46-218ENST00000496723 CRNNQ9UBG3 495 aaPredicted RBP3.33□□□□□ -1.88
CD46-218ENST00000496723 LRWD1Q9UFC0 647 aa3.33□□□□□ -1.88
CD46-218ENST00000496723 CHORDC1Q9UHD1 332 aaPredicted RBP3.33□□□□□ -1.88
CD46-218ENST00000496723 TP53BP1Q12888 1972 aaPredicted RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 TMEM221A6NGB7 291 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 KLF11O14901 512 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 ZNF500O60304 480 aaPredicted RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 HSPA8P11142 646 aaKnown RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 PTPN3P26045 913 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 KRT2P35908 639 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 NNMTP40261 264 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 MNDAP41218 407 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 LMAN1P49257 510 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 LUMP51884 338 aaPredicted RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 HNRNPDQ14103 355 aaKnown RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 CBWD6Q4V339 395 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 CBWD3Q5JTY5 395 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 CFAP161Q6P656 301 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 PSRC1Q6PGN9 363 aaPredicted RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 ADGRA1Q86SQ6 560 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 EID3Q8N140 333 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 SYT2Q8N9I0 419 aaPredicted RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 OR11H4Q8NGC9 324 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 CFAP61Q8NHU2 1237 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 PHLDA1Q8WV24 401 aaPredicted RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 SSMEM1Q8WWF3 244 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 SLAMF9Q96A28 289 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 SPDL1Q96EA4 605 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 MAGED4Q96JG8 741 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 LINC00479Q96M42 142 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 URM1Q9BTM9 101 aaKnown RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 KLHL4Q9C0H6 718 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 P2RY12Q9H244 342 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 FGF21Q9NSA1 209 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 BARHL2Q9NY43 387 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 TAB2Q9NYJ8 693 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 STK26Q9P289 416 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 EXOGQ9Y2C4 368 aaKnown RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 MAGED1Q9Y5V3 778 aaPredicted RBP3.32□□□□□ -1.88
CD46-218ENST00000496723 SMAD5-AS1Q9Y6J3 95 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 PCDH11YQ9BZA8 1340 aa3.32□□□□□ -1.88
CD46-218ENST00000496723 DFFBO76075 338 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 GPIP06744 558 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 DANCRP0C864 163 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 SMIM18P0DKX4 95 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 IGHV4-31P0DP07 118 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 PFKFB1P16118 471 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 JAK1P23458 1154 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 SLC6A12P48065 614 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 LIG4P49917 911 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 HERV-K104P61576 105 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 UBXN2AP68543 259 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 ZNF415Q09FC8 603 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 RALBP1Q15311 655 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 SLC1A5Q15758 541 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 KLHL26Q53HC5 615 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 SYT14P1Q58G82 188 aa3.31□□□□□ -1.88
CD46-218ENST00000496723 BMP2KLQ5H9B9 411 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms