RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 UGT2B28Q9BY64 529 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 ATP13A3Q9H7F0 1226 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 BRD9Q9H8M2 597 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 NPIPB15A6NHN6 443 aaPredicted RBP13.15□□□□□ -0.3
GPC1-209ENST00000495100 BBIP1A8MTZ0 92 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 E2F3O00716 465 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 ANGPTL1O95841 491 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 IGSF6O95976 241 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 ALPPL2P10696 532 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 BPIP17213 487 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 MATN1P21941 496 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 RNF144AP50876 292 aaPredicted RBP13.15□□□□□ -0.3
GPC1-209ENST00000495100 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
GPC1-209ENST00000495100 BROXQ5VW32 411 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 THAP5Q7Z6K1 395 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 PIK3C3Q8NEB9 887 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 MCOLN3Q8TDD5 553 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 PPP3R2Q96LZ3 170 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
GPC1-209ENST00000495100 CD300AQ9UGN4 299 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 PCDHGA8Q9Y5G5 932 aa13.15□□□□□ -0.3
GPC1-209ENST00000495100 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 KDELR3O43731 214 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 KDM1AO60341 852 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 VIPP01282 170 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ESR1P03372 595 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 BCKDHAP12694 445 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 EPORP19235 508 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 MSH3P20585 1137 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 BDKRB1P46663 353 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ZNF140P52738 457 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 RPS14P62263 151 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 NFATC2Q13469 925 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 RFTN1Q14699 578 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 GPR26Q8NDV2 337 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 L3HYPDHQ96EM0 354 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 APIPQ96GX9 242 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 MYRFLQ96LU7 910 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 BARD1Q99728 777 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 KLHL25Q9H0H3 589 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 EPB41L1Q9H4G0 881 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 ELOVL2Q9NXB9 296 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 C5AR2Q9P296 337 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 MBD1Q9UIS9 605 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 FPGTO14772 594 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 APOL3O95236 402 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 CLDN9O95484 217 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 NUDT7P0C024 238 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 HLA-EP13747 358 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 PFKLP17858 780 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 IGFBP5P24593 272 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 CDKN2CP42773 168 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 EIF2B2P49770 351 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 NTHL1P78549 312 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 DAG1Q14118 895 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 DPY19L3Q6ZPD9 716 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 PAGE2Q7Z2X7 111 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 EFL1Q7Z2Z2 1120 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 SPATA19Q7Z5L4 167 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 TMEM159Q96B96 161 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 EID2BQ96D98 161 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ZFYVE19Q96K21 471 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 LINC00597Q9H2U6 94 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ZNF696Q9H7X3 374 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 RAB23Q9ULC3 237 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 PCDHB14Q9Y5E9 798 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 AQP12BA6NM10 295 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 C16orf96A6NNT2 1141 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 DLGAP3O95886 979 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 EOMESO95936 686 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 C8BP07358 591 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 HRH2P25021 359 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ETV3P41162 512 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ACADVLP49748 655 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 SH3BGRP55822 239 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 INHBEP58166 350 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 RPS26P62854 115 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 TIAL1Q01085 375 aaKnown RBP eCLIP13.14□□□□□ -0.31
GPC1-209ENST00000495100 PLPP4Q5VZY2 271 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 CYP2U1Q7Z449 544 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 VRK3Q8IV63 474 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 AQP12AQ8IXF9 295 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 TMEM132CQ8N3T6 1108 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ZCCHC7Q8N3Z6 543 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 ZFAND2BQ8WV99 257 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 REXO4Q9GZR2 422 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 LHPPQ9H008 270 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 ARNT2Q9HBZ2 717 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 INTS10Q9NVR2 710 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 PDE10AQ9Y233 779 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 MED16Q9Y2X0 877 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 TNPO3Q9Y5L0 923 aaKnown RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 RGPD3A6NKT7 1758 aaPredicted RBP13.14□□□□□ -0.31
GPC1-209ENST00000495100 RGPD4Q7Z3J3 1758 aa13.14□□□□□ -0.31
GPC1-209ENST00000495100 TRBV23OR9-2A0A075B6M9 112 aa13.13□□□□□ -0.31
GPC1-209ENST00000495100 ASPDHA6ND91 283 aa13.13□□□□□ -0.31
GPC1-209ENST00000495100 A8MU76 341 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms