RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 MFSD10Q14728 455 aa15.03■□□□□ -0
SDF4-207ENST00000494748 PLEKHG6Q3KR16 790 aa15.03■□□□□ -0
SDF4-207ENST00000494748 SLX4IPQ5VYV7 408 aa15.03■□□□□ -0
SDF4-207ENST00000494748 FBXL22Q6P050 247 aa15.03■□□□□ -0
SDF4-207ENST00000494748 AFTPHQ6ULP2 937 aa15.03■□□□□ -0
SDF4-207ENST00000494748 SBSNQ6UWP8 590 aa15.03■□□□□ -0
SDF4-207ENST00000494748 GCNT7Q6ZNI0 430 aa15.03■□□□□ -0
SDF4-207ENST00000494748 CAPSLQ8WWF8 208 aa15.03■□□□□ -0
SDF4-207ENST00000494748 CDADC1Q9BWV3 514 aa15.03■□□□□ -0
SDF4-207ENST00000494748 HAS3O00219 553 aa15.02■□□□□ -0
SDF4-207ENST00000494748 B3GALT4O96024 378 aa15.02■□□□□ -0
SDF4-207ENST00000494748 PKMP14618 531 aaKnown RBP15.02■□□□□ -0
SDF4-207ENST00000494748 GTF2E2P29084 291 aaKnown RBP15.02■□□□□ -0
SDF4-207ENST00000494748 GJA5P36382 358 aa15.02■□□□□ -0
SDF4-207ENST00000494748 NEK2P51955 445 aa15.02■□□□□ -0
SDF4-207ENST00000494748 SLC14A1Q13336 389 aa15.02■□□□□ -0
SDF4-207ENST00000494748 AGMOQ6ZNB7 445 aa15.02■□□□□ -0
SDF4-207ENST00000494748 GDPD3Q7L5L3 318 aa15.02■□□□□ -0
SDF4-207ENST00000494748 RAVER1Q8IY67 606 aaKnown RBP15.02■□□□□ -0
SDF4-207ENST00000494748 POC5Q8NA72 575 aa15.02■□□□□ -0
SDF4-207ENST00000494748 IL17RDQ8NFM7 739 aa15.02■□□□□ -0
SDF4-207ENST00000494748 MOV10Q9HCE1 1003 aaKnown RBP15.02■□□□□ -0
SDF4-207ENST00000494748 SIRT5Q9NXA8 310 aa15.02■□□□□ -0
SDF4-207ENST00000494748 A0A0U1RQS6 177 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 ILVBLA1L0T0 632 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 PCDHGA12O60330 932 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 PRAMEF11O60813 436 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 GTF2H2Q13888 395 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.02□□□□□ -0.01
SDF4-207ENST00000494748 LRIF1Q5T3J3 769 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 GTF2H2CQ6P1K8 395 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 ZDHHC21Q8IVQ6 265 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 METTL4Q8N3J2 472 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 SLC38A4Q969I6 547 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 TRPV5Q9NQA5 729 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 ELOVL2Q9NXB9 296 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 FBXL12Q9NXK8 326 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 NUDT4Q9NZJ9 180 aa15.02□□□□□ -0.01
SDF4-207ENST00000494748 TAPBPO15533 448 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 SSX4O60224 188 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 ODC1P11926 461 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 SLC2A4P14672 509 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 CLCN7P51798 805 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 CAMK2BQ13554 666 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 LRRC8DQ7L1W4 858 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 PLD3Q8IV08 490 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 PARP16Q8N5Y8 322 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 PITX2Q99697 317 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 NEK6Q9HC98 313 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 FAM105AQ9NUU6 356 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 C1orf109Q9NX04 203 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 CAB39Q9Y376 341 aaPredicted RBP15.01□□□□□ -0.01
SDF4-207ENST00000494748 ORC6Q9Y5N6 252 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 NDUFS3O75489 264 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 PRLP01236 227 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 IL2P60568 153 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 FAM171A1Q5VUB5 890 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 PNCKQ6P2M8 343 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 LIX1Q8N485 282 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 CELF2-AS1Q8N7Q2 184 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 ATL1Q8WXF7 558 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 DNASE1L2Q92874 299 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 SDHCQ99643 169 aaPredicted RBP15.01□□□□□ -0.01
SDF4-207ENST00000494748 EPS8L2Q9H6S3 715 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 SCN3BQ9NY72 215 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 GMPPBQ9Y5P6 360 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 SAGE2PA6NJ88 616 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 DRGXA6NNA5 263 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 AKT1P31749 480 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 RGRP47804 291 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 TUBA1BP68363 451 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 CREMQ03060 361 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 TUBA1AQ71U36 451 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 SPATC1Q76KD6 591 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 LILRB4Q8NHJ6 448 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 NCLNQ969V3 563 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 ITPAQ9BY32 194 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 SCN8AQ9UQD0 1980 aa15.01□□□□□ -0.01
SDF4-207ENST00000494748 IQCF5A8MTL0 148 aa15□□□□□ -0.01
SDF4-207ENST00000494748 M0QZQ0 153 aa15□□□□□ -0.01
SDF4-207ENST00000494748 ASNA1O43681 348 aa15□□□□□ -0.01
SDF4-207ENST00000494748 FAM20BO75063 409 aa15□□□□□ -0.01
SDF4-207ENST00000494748 VPS26AO75436 327 aa15□□□□□ -0.01
SDF4-207ENST00000494748 SYT16Q17RD7 645 aa15□□□□□ -0.01
SDF4-207ENST00000494748 USP43Q70EL4 1123 aa15□□□□□ -0.01
SDF4-207ENST00000494748 TSPYL5Q86VY4 417 aaPredicted RBP15□□□□□ -0.01
SDF4-207ENST00000494748 HASPINQ8TF76 798 aa15□□□□□ -0.01
SDF4-207ENST00000494748 CCDC97Q96F63 343 aaPredicted RBP15□□□□□ -0.01
SDF4-207ENST00000494748 PPP3R2Q96LZ3 170 aa15□□□□□ -0.01
SDF4-207ENST00000494748 INPP5KQ9BT40 448 aa15□□□□□ -0.01
SDF4-207ENST00000494748 TRMT6Q9UJA5 497 aaKnown RBP15□□□□□ -0.01
SDF4-207ENST00000494748 A3GALT2U3KPV4 340 aa15□□□□□ -0.01
SDF4-207ENST00000494748 F8W810 466 aa15□□□□□ -0.01
SDF4-207ENST00000494748 KMOO15229 486 aa15□□□□□ -0.01
SDF4-207ENST00000494748 DLGAP3O95886 979 aa15□□□□□ -0.01
SDF4-207ENST00000494748 IL6P05231 212 aa15□□□□□ -0.01
SDF4-207ENST00000494748 ITGB1P05556 798 aa15□□□□□ -0.01
SDF4-207ENST00000494748 SERPINF2P08697 491 aa15□□□□□ -0.01
SDF4-207ENST00000494748 MYCLP1P12525 358 aaPredicted RBP15□□□□□ -0.01
SDF4-207ENST00000494748 GADD45AP24522 165 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms