RNA–Protein interactions for RNA: ENST00000487841.5

SFT2D1-204, Transcript of SFT2 domain containing 1, humanhuman

TSL 1 (best)

Gene SFT2D1, Length 2,576 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-204ENST00000487841 DDX39BQ13838 428 aaKnown RBP12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 ATP6AP1Q15904 470 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 PGS1Q32NB8 556 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 CCSMST1Q4G0I0 132 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 INTS11Q5TA45 600 aaKnown RBP12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 CDC26Q8NHZ8 85 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 APIPQ96GX9 242 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 INPP5KQ9BT40 448 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 C9orf16Q9BUW7 83 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 SLC32A1Q9H598 525 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 PARVBQ9HBI1 364 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 PNPLA3Q9NST1 481 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 THEGQ9P2T0 379 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 ITM2BQ9Y287 266 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 PCDHB14Q9Y5E9 798 aa12.49□□□□□ -0.41
SFT2D1-204ENST00000487841 KLHL33A6NCF5 533 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 H0YJX3 145 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 GRM6O15303 877 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 LDLRP01130 860 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 ADH1AP07327 375 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 OR56A5P0C7T3 313 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 AOAHP28039 575 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 CDKN2CP42773 168 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 NR1H2P55055 460 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 AASDHQ4L235 1098 aaPredicted RBP12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 USP39Q53GS9 565 aaKnown RBP12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 AP1ARQ63HQ0 302 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 GDPD4Q6W3E5 623 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 TRIM46Q7Z4K8 759 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 NCSTNQ92542 709 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 ELMO1Q92556 727 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 APOLD1Q96LR9 279 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 ELOVL6Q9H5J4 265 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 TDP1Q9NUW8 608 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 C1orf109Q9NX04 203 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 LIMD1Q9UGP4 676 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 U3KQV3 271 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 TRANK1O15050 2925 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 ARNTLO00327 626 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 PER2O15055 1255 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 RASAL1O95294 804 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 CTSLP07711 333 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 HIST1H2AGP0C0S8 130 aaPredicted RBP12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 HIST1H2ADP20671 130 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 RPS9P46781 194 aaKnown RBP12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 PREPP48147 710 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 MRPL19P49406 292 aaKnown RBP12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 SLC36A3Q495N2 470 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 CYBRD1Q53TN4 286 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 CACHD1Q5VU97 1274 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 IRF7Q92985 503 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 HIST1H2AHQ96KK5 128 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 MCCC1Q96RQ3 725 aaPredicted RBP12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 HIST1H2AJQ99878 128 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 H2AFJQ9BTM1 129 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 ZDHHC4Q9NPG8 344 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 ADGRE2Q9UHX3 823 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 INVSQ9Y283 1065 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 ZNF510Q9Y2H8 683 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 PCDHB3Q9Y5E6 796 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 FADS3Q9Y5Q0 445 aa12.48□□□□□ -0.41
SFT2D1-204ENST00000487841 NOTCH4Q99466 2003 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 ANTXRLA6NF34 631 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 FADS2P1A8MWK0 482 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 IFRD1O00458 451 aaPredicted RBP12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 CLOCKO15516 846 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 NOBOXO60393 691 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 MOSPD3O75425 235 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 MYCLP1P12525 358 aaPredicted RBP12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 CDH2P19022 906 aaPredicted RBP12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 PRKACGP22612 351 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 SLC5A2P31639 672 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 PPM1AP35813 382 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 HALP42357 657 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 CYP4F3Q08477 520 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 SLC14A1Q13336 389 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 LSAMPQ13449 338 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 TMTC4Q5T4D3 741 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 LYPLAL1Q5VWZ2 237 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 GALNT10Q86SR1 603 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 TBC1D21Q8IYX1 336 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 ASB11Q8WXH4 323 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 USP7Q93009 1102 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 TMBIM1Q969X1 311 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 ZBTB18Q99592 522 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 RIOK2Q9BVS4 552 aaKnown RBP12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 OCEL1Q9H607 264 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 CLK4Q9HAZ1 481 aaKnown RBP12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 CEPT1Q9Y6K0 416 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 SPEGQ15772 3267 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 SLC28A1O00337 649 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 GSTA4O15217 222 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 TIMP1P01033 207 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 RHOP08100 348 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 GGT1P19440 569 aa12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 PBLDP30039 288 aaPredicted RBP12.47□□□□□ -0.41
SFT2D1-204ENST00000487841 MTHFRP42898 656 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms