RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RHEBL1Q8TAI7 183 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 PROKR1Q8TCW9 393 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 CCDC126Q96EE4 140 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 ZNF300Q96RE9 604 aaPredicted RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 HOPXQ9BPY8 73 aaPredicted RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 TMEM39AQ9NV64 488 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 AIG1Q9NVV5 245 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 TMEM248Q9NWD8 314 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 CRNNQ9UBG3 495 aaPredicted RBP8.21□□□□□ -1.09
VAPB-205ENST00000476395 ANAPC2Q9UJX6 822 aa8.21□□□□□ -1.09
VAPB-205ENST00000476395 A8MUA0 341 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 EEDO75530 441 aaKnown RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 CYP7B1O75881 506 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 EIF2S1P05198 315 aaKnown RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 SNRPD2P62316 118 aaKnown RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 DGUOKQ16854 277 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 PFKFB4Q16877 469 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 IGSF11Q5DX21 431 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 COQ5Q5HYK3 327 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 Q6ZSR9 355 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 C10orf111Q8N326 155 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 MCOLN3Q8TDD5 553 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 FUBP1Q96AE4 644 aaKnown RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 ST6GAL2Q96JF0 529 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 MID1IP1Q9NPA3 183 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 CCDC177Q9NQR7 707 aaPredicted RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 PLSCR2Q9NRY7 297 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 INTS10Q9NVR2 710 aaKnown RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 ERVK13-1Q9NX77 482 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 UXTQ9UBK9 157 aaPredicted RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 CCL27Q9Y4X3 112 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 PDZK1P1A8MUH7 402 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 CDC7O00311 574 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 AZIN1O14977 448 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 SOAT2O75908 522 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 TBX18O95935 607 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 CCR1P32246 355 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 HTR7P34969 479 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 ACVRL1P37023 503 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 RGRP47804 291 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 DSTNP60981 165 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 STX1BP61266 288 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 IL1RL1Q01638 556 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 DSC3Q14574 896 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 ZFP69Q49AA0 526 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 PRSS36Q5K4E3 855 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 ALG1LQ6GMV1 187 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 GLYATQ6IB77 296 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 GDF6Q6KF10 455 aaPredicted RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 CES5AQ6NT32 575 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 DPP9Q86TI2 863 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 P2RY8Q86VZ1 359 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 TEX19Q8NA77 164 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 PNPT1Q8TCS8 783 aaKnown RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 JPH3Q8WXH2 748 aaPredicted RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 VPS35Q96QK1 796 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 OR2B2Q9GZK3 357 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 RGS18Q9NS28 235 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 TRMT13Q9NUP7 481 aaKnown RBP8.21□□□□□ -1.1
VAPB-205ENST00000476395 PLXNB3Q9ULL4 1909 aa8.21□□□□□ -1.1
VAPB-205ENST00000476395 CCL15-CCL14A0A0B4J2E2 113 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 A0A1W2PP18 115 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 SYCE1LA8MT33 242 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 CENPBD1B2RD01 187 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ANGPT2O15123 496 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 SEMA3DO95025 777 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PGLSO95336 258 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 IL33O95760 270 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PRLP01236 227 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PIRTP0C851 137 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 HGFP14210 728 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 CTGFP29279 349 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 HTR3AP46098 478 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ZNF140P52738 457 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 OR2B6P58173 313 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 TP53BP2Q13625 1128 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 DAG1Q14118 895 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 TRIP4Q15650 581 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 CCL15Q16663 113 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 AASDHQ4L235 1098 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 BCL7AQ4VC05 210 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 AGAP6Q5VW22 663 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 RGMBQ6NW40 437 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ENPP6Q6UWR7 440 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PARP16Q8N5Y8 322 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MDGA1Q8NFP4 955 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 LGALS12Q96DT0 336 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 TSNARE1Q96NA8 513 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ZNF599Q96NL3 588 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 AGAP4Q96P64 663 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 YME1L1Q96TA2 773 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ACOX2Q99424 681 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 BARD1Q99728 777 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 AARSD1Q9BTE6 412 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 IKZF5Q9H5V7 419 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 RANGRFQ9HD47 186 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 POLMQ9NP87 494 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 MRPL40Q9NQ50 206 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms