RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 WISP3O95389 354 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-204ENST00000469054 C8GP07360 202 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 STMN1P16949 149 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 PKLRP30613 574 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 RAB10P61026 200 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 PPP1CAP62136 330 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 C16orf72Q14CZ0 275 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 ZKSCAN8Q15776 578 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-204ENST00000469054 CCSMST1Q4G0I0 132 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 MROH9Q5TGP6 573 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 FAM92BQ6ZTR7 304 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 UBE2R2Q712K3 238 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-204ENST00000469054 RAB42Q8N4Z0 105 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 NKAPQ8N5F7 415 aaKnown RBP11.58□□□□□ -0.56
VPS13D-204ENST00000469054 OR9A1PQ8NGU1 263 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 WDR36Q8NI36 951 aaKnown RBP11.58□□□□□ -0.56
VPS13D-204ENST00000469054 ANKRD7Q92527 254 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 DLG3Q92796 817 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 CD180Q99467 661 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 PAFAH2Q99487 392 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 PKP4Q99569 1192 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 RAB11FIP5Q9BXF6 653 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 SLC12A9Q9BXP2 914 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 NRSN2Q9GZP1 204 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 ACTR10Q9NZ32 417 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 AKAP7Q9P0M2 348 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-204ENST00000469054 SPATA7Q9P0W8 599 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 LNPEPQ9UIQ6 1025 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 IKBKGQ9Y6K9 419 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 KNTC1P50748 2209 aa11.58□□□□□ -0.56
VPS13D-204ENST00000469054 EXOC1LA0A1B0GW35 172 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 PIPSLA2A3N6 862 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 GSAPA4D1B5 854 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 KRT87PA6NCN2 255 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 TRABD2BA6NFA1 517 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 A8MU76 341 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 C2orf74A8MZ97 194 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 MYO1CO00159 1063 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 RASSF9O75901 435 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 TUBBP07437 444 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 CHRM5P08912 532 aaPredicted RBP11.57□□□□□ -0.56
VPS13D-204ENST00000469054 ANKRD34CP0C6C1 535 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 CYP2A7P20853 494 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 CRABP2P29373 138 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 PRDX3P30048 256 aaKnown RBP11.57□□□□□ -0.56
VPS13D-204ENST00000469054 CSTF2P33240 577 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS13D-204ENST00000469054 LSSP48449 732 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 SERPINB9P50453 376 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 KPNA2P52292 529 aaKnown RBP11.57□□□□□ -0.56
VPS13D-204ENST00000469054 SP140Q13342 867 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 BMPR2Q13873 1038 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 CACHD1Q5VU97 1274 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 EMBQ6PCB8 327 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 RAB11FIP2Q7L804 512 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 PRSS42Q7Z5A4 293 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 CMC1Q7Z7K0 106 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 FBXO39Q8N4B4 442 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 LINC01555Q8NAE3 123 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 AGBL5Q8NDL9 886 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 OR2L8Q8NGY9 312 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 HMGCLL1Q8TB92 370 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 MCOLN3Q8TDD5 553 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 DENND1AQ8TEH3 1009 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 AENQ8WTP8 325 aaKnown RBP11.57□□□□□ -0.56
VPS13D-204ENST00000469054 ANKRD49Q8WVL7 239 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 UBLCP1Q8WVY7 318 aaPredicted RBP11.57□□□□□ -0.56
VPS13D-204ENST00000469054 IL17FQ96PD4 163 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 MAP3K3Q99759 626 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 TWSG1Q9GZX9 223 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 OCEL1Q9H607 264 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 PARVBQ9HBI1 364 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 SPHK1Q9NYA1 384 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 SEMA5BQ9P283 1151 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 ZNF180Q9UJW8 692 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 ADAMTS6Q9UKP5 1117 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 POMT2Q9UKY4 750 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 RAB21Q9UL25 225 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 SATB2Q9UPW6 733 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 PDE10AQ9Y233 779 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 LOXL2Q9Y4K0 774 aa11.57□□□□□ -0.56
VPS13D-204ENST00000469054 IGHV5-51A0A0C4DH38 117 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 A0A1W2PNU3 283 aaPredicted RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 TLCD2A6NGC4 264 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 ISM1B1AKI9 464 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 AGRPO00253 132 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 PLD2O14939 933 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 KIF1CO43896 1103 aaKnown RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 KRT38O76015 456 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 MPOP05164 745 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 HIST1H2AGP0C0S8 130 aaPredicted RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 ERGP11308 486 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 HIST1H2ADP20671 130 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 PEBP1P30086 187 aaKnown RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 HSD17B2P37059 387 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 NAA30Q147X3 362 aaPredicted RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 KIR2DS3Q14952 304 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 ARHGAP19Q14CB8 494 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 RTP5Q14D33 572 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 CYP2A13Q16696 494 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms