RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	PHLDA2	Q53GA4	152 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	TMEM211	Q6ICI0	200 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	BRINP3	Q76B58	766 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	TMEM139	Q8IV31	216 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	LSMEM1	Q8N8F7	131 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	LPGAT1	Q92604	370 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	JAKMIP2	Q96AA8	810 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	SLC22A18	Q96BI1	424 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	POM121L2	Q96KW2	1035 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	NUP85	Q9BW27	656 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	B3GAT1	Q9P2W7	334 aa		4.91	□□□□□ -1.62
CCNL1-209	ENST00000467081	LOC100509620	A0A075B734	347 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	NDUFAF8	A1L188	74 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	TSPY2	A6NKD2	308 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081		A8MV72	311 aa	Predicted RBP	4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	OR10H2	O60403	315 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	WDPCP	O95876	746 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	DNTT	P04053	509 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	TSPY3	P0CV98	308 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	TSPY8	P0CW00	308 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	DNASE1	P24855	282 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	SLC6A12	P48065	614 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	TSPY1	Q01534	308 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	TEAD2	Q15562	447 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	GUF1	Q8N442	669 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	MAPK1IP1L	Q8NDC0	245 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	APPL2	Q8NEU8	664 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	SNRNP27	Q8WVK2	155 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	MAGED4	Q96JG8	741 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	FNBP1	Q96RU3	617 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	SLF1	Q9BQI6	1058 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	GIMAP4	Q9NUV9	329 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	ZNF701	Q9NV72	531 aa	Predicted RBP	4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	NKIRAS2	Q9NYR9	191 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	CACNG4	Q9UBN1	327 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	TMEM5	Q9Y2B1	443 aa		4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	EXOG	Q9Y2C4	368 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	WBP11	Q9Y2W2	641 aa	Known RBP	4.9	□□□□□ -1.63
CCNL1-209	ENST00000467081	BEST1	O76090	585 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	OR2T7	P0C7T2	308 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	EIF2D	P41214	584 aa	Known RBP	4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	SLC9A3	P48764	834 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	CDH13	P55290	713 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	ARMC3	Q5W041	872 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	STXBP4	Q6ZWJ1	553 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	CDK20	Q8IZL9	346 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	EXD1	Q8NHP7	514 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	MS4A10	Q96PG2	267 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	P2RY12	Q9H244	342 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	TAB2	Q9NYJ8	693 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	DAPK2	Q9UIK4	370 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	SNX8	Q9Y5X2	465 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	PRSS21	Q9Y6M0	314 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	RNF215	Q9Y6U7	377 aa		4.89	□□□□□ -1.63
CCNL1-209	ENST00000467081	ANKRD61	A6NGH8	418 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	ERI2	A8K979	691 aa	Known RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	KLF11	O14901	512 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	RNASEH1	O60930	286 aa	Known RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	GPI	P06744	558 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	DPEP1	P16444	411 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	CA6	P23280	308 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	IFI35	P80217	286 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	BECN1	Q14457	450 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	ITPRIPL2	Q3MIP1	535 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	KLHL26	Q53HC5	615 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	MINDY1	Q8N5J2	469 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	NPEPL1	Q8NDH3	523 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	CCDC107	Q8WV48	283 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	PRPF31	Q8WWY3	499 aa	Known RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	AP1M1	Q9BXS5	423 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	PDE7B	Q9NP56	450 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	SERINC1	Q9NRX5	453 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	MRPL15	Q9P015	296 aa	Known RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	NME7	Q9Y5B8	376 aa		4.88	□□□□□ -1.63
CCNL1-209	ENST00000467081	KRTAP16-1	A8MUX0	517 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	MEIS2	O14770	477 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	PLOD3	O60568	738 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	ZFAND5	O76080	213 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	KRT5	P13647	590 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	TYMP	P19971	482 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	STK4	Q13043	487 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	ELFN2	Q5R3F8	820 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	EID3	Q8N140	333 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	RAB42	Q8N4Z0	105 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	ZNF614	Q8N883	585 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	OR11H4	Q8NGC9	324 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.87	□□□□□ -1.63	2e-20	■■■□□ 15.3
CCNL1-209	ENST00000467081	ZNF689	Q96CS4	500 aa	Predicted RBP	4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	SYT15	Q9BQS2	421 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	URM1	Q9BTM9	101 aa	Known RBP	4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	MCRIP2	Q9BUT9	160 aa	Known RBP	4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	OPA3	Q9H6K4	179 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	SLC35C2	Q9NQQ7	365 aa		4.87	□□□□□ -1.63
CCNL1-209	ENST00000467081	FGF21	Q9NSA1	209 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms