RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 UGT1A1P22309 533 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 UGT1A4P22310 534 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 UGT1A3P35503 534 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 UGT1A5P35504 534 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CBSP35520 551 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 STAT5AP42229 794 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 WASP42768 502 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 PSMD8P48556 350 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CDKN1CP49918 316 aaPredicted RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 CCR3P51677 355 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CCR5P51681 352 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 KPNA2P52292 529 aaKnown RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 METAP1P53582 386 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 ATP6V0D1P61421 351 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 RPL11P62913 178 aaKnown RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 ZXDAP98168 799 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 IL9RQ01113 521 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 PLOD1Q02809 727 aaPredicted RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 MAP4K2Q12851 820 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 GBX1Q14549 363 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 ACAP2Q15057 778 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 BCL7AQ4VC05 210 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 ATP13A5Q4VNC0 1218 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 SETMARQ53H47 684 aaPredicted RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 TAF1BQ53T94 588 aaPredicted RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 ZNF789Q5FWF6 425 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 PLEKHS1Q5SXH7 462 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 AGAP9Q5VTM2 703 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 LRRC8EQ6NSJ5 796 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 PNCKQ6P2M8 343 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 FAM151BQ6UXP7 276 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CDHR3Q6ZTQ4 885 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 TTLL10Q6ZVT0 673 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 NEK10Q6ZWH5 1172 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 HORMAD1Q86X24 394 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 OR2T34Q8NGX1 318 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 OR6Y1Q8NGX8 325 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 RHEBL1Q8TAI7 183 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 RAB3IL1Q8TBN0 382 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 RDH11Q8TC12 318 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CKAP2Q8WWK9 683 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 INPP5DQ92835 1189 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 GLYATL1Q969I3 302 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 AP2M1Q96CW1 435 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 COX14Q96I36 57 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CCDC140Q96MF4 163 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 GPR78Q96P69 363 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 SPATA9Q9BWV2 254 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 C1QTNF7Q9BXJ2 289 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 TEX101Q9BY14 249 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 SLC17A9Q9BYT1 436 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 TRIM55Q9BYV6 548 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 DERL2Q9GZP9 239 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 EPN3Q9H201 632 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 TFB2MQ9H5Q4 396 aaKnown RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 RMI1Q9H9A7 625 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 NMRAL1Q9HBL8 299 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 KCNK9Q9NPC2 374 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 NKIRAS1Q9NYS0 192 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 IL1RAPL1Q9NZN1 696 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CRLS1Q9UJA2 301 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 GNPTGQ9UJJ9 305 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 SLC39A10Q9ULF5 831 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 GPR34Q9UPC5 381 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 ZFR2Q9UPR6 939 aaKnown RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 DMTF1Q9Y222 760 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 CRYL1Q9Y2S2 319 aa5.39□□□□□ -1.55
VPS41-211ENST00000466017 LAMA2P24043 3122 aaKnown RBP5.39□□□□□ -1.55
VPS41-211ENST00000466017 TRPM6Q9BX84 2022 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 ATG2BQ96BY7 2078 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 A0A0U1RQS6 177 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 LRRC72A6NJI9 287 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 A8MX80 341 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 CCL22O00626 93 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 NEMP1O14524 444 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 LATO43561 262 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 SGTAO43765 313 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 MAGEC1O60732 1142 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 GPC4O75487 556 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 RHOBTB1O94844 696 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 BPGMP07738 259 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 LTA4HP09960 611 aaKnown RBP5.38□□□□□ -1.55
VPS41-211ENST00000466017 MPC1LP0DKB6 136 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 ACADMP11310 421 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 ENO3P13929 434 aaPredicted RBP5.38□□□□□ -1.55
VPS41-211ENST00000466017 ZNF37AP17032 561 aaPredicted RBP5.38□□□□□ -1.55
VPS41-211ENST00000466017 DGKAP23743 735 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 FMO4P31512 558 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 CA5AP35218 305 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 RPA3P35244 121 aaPredicted RBP5.38□□□□□ -1.55
VPS41-211ENST00000466017 MAPK9P45984 424 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 GPR1P46091 355 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 ADPRHP54922 357 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 DNAJB13P59910 316 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 YPEL5P62699 121 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 B4GALNT1Q00973 533 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 SIGLEC14Q08ET2 396 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 TMEM115Q12893 351 aaPredicted RBP5.38□□□□□ -1.55
VPS41-211ENST00000466017 LSAMPQ13449 338 aa5.38□□□□□ -1.55
VPS41-211ENST00000466017 BMPR2Q13873 1038 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms