RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 DDX50Q9BQ39 737 aaKnown RBP7.06□□□□□ -1.28
LRCH3-210ENST00000461674 KCNK12Q9HB15 430 aa7.06□□□□□ -1.28
LRCH3-210ENST00000461674 MYNNQ9NPC7 610 aa7.06□□□□□ -1.28
LRCH3-210ENST00000461674 TCF7L2Q9NQB0 619 aa7.06□□□□□ -1.28
LRCH3-210ENST00000461674 ZNHIT6Q9NWK9 470 aaKnown RBP7.06□□□□□ -1.28
LRCH3-210ENST00000461674 TMEM184BQ9Y519 407 aaPredicted RBP7.06□□□□□ -1.28
LRCH3-210ENST00000461674 TMEM2Q9UHN6 1383 aa7.06□□□□□ -1.28
LRCH3-210ENST00000461674 ERVK-7P63135 1459 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 CAMSAP2Q08AD1 1489 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 CEP162Q5TB80 1403 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 ILVBLA1L0T0 632 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 CLIC1O00299 241 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 CASC3O15234 703 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 MAPK13O15264 365 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 RNMTO43148 476 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 CACNG3O60359 315 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 TOM1L1O75674 476 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 SURF6O75683 361 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 LIPFP07098 398 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 DDX5P17844 614 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 PTPN6P29350 595 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 COPB1P53618 953 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 PRRX1P54821 245 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 GALNT3Q14435 633 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 MELKQ14680 651 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 PRAMEF19Q5SWL8 479 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 TPRG1Q6ZUI0 275 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 LRRC70Q7Z2Q7 622 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 PARP16Q8N5Y8 322 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 PAPD5Q8NDF8 572 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 FAM71CQ8NEG0 241 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 MCPH1Q8NEM0 835 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 OR1J2Q8NGS2 313 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 HM13Q8TCT9 377 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 FBXO32Q969P5 355 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 ESAMQ96AP7 390 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 C16orf58Q96GQ5 468 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 ZNF559Q9BR84 538 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 THAP7Q9BT49 309 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 EGLN1Q9GZT9 426 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 RAD21L1Q9H4I0 556 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 CATSPERBQ9H7T0 1116 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 ACTR5Q9H9F9 607 aaPredicted RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 TBC1D17Q9HA65 648 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 FAM114A2Q9NRY5 505 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 ZCCHC3Q9NUD5 404 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 RAB20Q9NX57 234 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 PTGFRNQ9P2B2 879 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 DLGAP4Q9Y2H0 992 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 HBS1LQ9Y450 684 aaKnown RBP7.05□□□□□ -1.28
LRCH3-210ENST00000461674 MSH6P52701 1360 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 MTUS2Q5JR59 1369 aa7.05□□□□□ -1.28
LRCH3-210ENST00000461674 CCDC141Q6ZP82 1450 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 CDC42BPAQ5VT25 1732 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 SRCAPQ6ZRS2 3230 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 A0A1W2PPW3 197 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 CXorf65A6NEN9 183 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 H0YIG0 161 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 B4GALT4O60513 344 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 PAHP00439 452 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 CSF2RAP15509 400 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 SPINK2P20155 84 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 CD9P21926 228 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 PCSK6P29122 969 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 ALDH4A1P30038 563 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 MMP13P45452 471 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 LHX1P48742 406 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 EFTUD2Q15029 972 aaKnown RBP eCLIP7.04□□□□□ -1.28
LRCH3-210ENST00000461674 PLEKHO1Q53GL0 409 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-210ENST00000461674 RNASE12Q5GAN4 147 aaKnown RBP7.04□□□□□ -1.28
LRCH3-210ENST00000461674 C9orf50Q5SZB4 431 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 C1orf185Q5T7R7 199 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 ARMC6Q6NXE6 501 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 WDR53Q7Z5U6 358 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-210ENST00000461674 ZDHHC21Q8IVQ6 265 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 LRRC43Q8N309 656 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 NIPA2Q8N8Q9 360 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 OR2T3Q8NH03 318 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 TBC1D16Q8TBP0 767 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 PBKQ96KB5 322 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 RPGRIP1Q96KN7 1286 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 CDK5RAP1Q96SZ6 601 aaKnown RBP7.04□□□□□ -1.28
LRCH3-210ENST00000461674 MMS19Q96T76 1030 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 MNTQ99583 582 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 GATA5Q9BWX5 397 aaPredicted RBP7.04□□□□□ -1.28
LRCH3-210ENST00000461674 TBC1D10AQ9BXI6 508 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 FSD1LQ9BXM9 530 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 CAPS2Q9BXY5 557 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 MCOLN1Q9GZU1 580 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 TMEM39BQ9GZU3 492 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 VCX2Q9H322 139 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 SEC61A2Q9H9S3 476 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 DUSP22Q9NRW4 184 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 PIGVQ9NUD9 493 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 TCP11L1Q9NUJ3 509 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 STK39Q9UEW8 545 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 SUN2Q9UH99 717 aa7.04□□□□□ -1.28
LRCH3-210ENST00000461674 ABT1Q9ULW3 272 aaKnown RBP7.04□□□□□ -1.28
LRCH3-210ENST00000461674 MGAT4BQ9UQ53 548 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms