RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 LDB1Q86U70 411 aaPredicted RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 TRIM74Q86UV6 250 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 SPATS2Q86XZ4 545 aaKnown RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 DENND6AQ8IWF6 608 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 TRIM48Q8IWZ4 208 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 HOMEZQ8IX15 550 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 PIANPQ8IYJ0 282 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 CFAP206Q8IYR0 622 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 RIBC1Q8N443 379 aaPredicted RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 RAB42Q8N4Z0 105 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 MREGQ8N565 214 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 NKAPQ8N5F7 415 aaKnown RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 ZBTB2Q8N680 514 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 CLDN19Q8N6F1 224 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 FAM46DQ8NEK8 389 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 OR6C4Q8NGE1 309 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 OR2L2Q8NH16 312 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 BAHD1Q8TBE0 780 aaPredicted RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 LMX1AQ8TE12 382 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 SKA2Q8WVK7 121 aaPredicted RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 OR1E3Q8WZA6 343 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 LPGAT1Q92604 370 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 KCNJ9Q92806 393 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 SH3KBP1Q96B97 665 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 MRRFQ96E11 262 aaKnown RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 ELMO2Q96JJ3 720 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 CABS1Q96KC9 395 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 LINC00615Q96LM1 132 aaPredicted RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 RBBP8Q99708 897 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 DPEP2Q9H4A9 486 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 OSGEPL1Q9H4B0 414 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 FGF22Q9HCT0 170 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 SARS2Q9NP81 518 aaKnown RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 TMEM9BQ9NQ34 198 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 FBXO6Q9NRD1 293 aaPredicted RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 GPR27Q9NS67 375 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 KLC4Q9NSK0 619 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 SEMA4GQ9NTN9 838 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 FAM86C1Q9NVL1 165 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 MARCH4Q9P2E8 410 aaPredicted RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 ZNF180Q9UJW8 692 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 PCDHGB2Q9Y5G2 931 aa5.82□□□□□ -1.48
NUP98-208ENST00000461047 MYO18AQ92614 2054 aaKnown RBP5.82□□□□□ -1.48
NUP98-208ENST00000461047 BDP1A6H8Y1 2624 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 A0A087X1B8 175 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 KIR2DS5A0A0G2JLQ3 304 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 A0A0G2JNG1 304 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 TLDC2A0PJX2 215 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 LMO7DNF2Z398 122 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 KIR2DS3K7RE56 304 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 SCAMP1O15126 338 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 FLRT2O43155 660 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 OPA1O60313 960 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 OR1I1O60431 355 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 SNX2O60749 519 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 TCEA3O75764 348 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 PIAS2O75928 621 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 TSPAN15O95858 294 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 MT-ND3P03897 115 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 MPOP05164 745 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 NUDT17P0C025 328 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 HIST1H2AGP0C0S8 130 aaPredicted RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 ACP5P13686 325 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 KRT15P19012 456 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 HIST1H2ADP20671 130 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 TYK2P29597 1187 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 PBLDP30039 288 aaPredicted RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 SLC26A3P40879 764 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 GRK6P43250 576 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 PPM1FP49593 454 aaPredicted RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 SERPINB8P50452 374 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 LIMK2P53671 638 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 MPP1Q00013 466 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 NHLH1Q02575 133 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 DMPKQ09013 629 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 HSPA14Q0VDF9 509 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 EIF2B5Q13144 721 aaKnown RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 GPS2Q13227 327 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 BOP1Q14137 746 aaKnown RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 KIR2DS5Q14953 304 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 RASA2Q15283 850 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 SMAD1Q15797 465 aaKnown RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 TAF1BQ53T94 588 aaPredicted RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 ZNF542PQ5EBM4 170 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 HECTD2Q5U5R9 776 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 AGAP9Q5VTM2 703 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 METRNLQ641Q3 311 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 ZCCHC8Q6NZY4 707 aaKnown RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 KLHL35Q6PF15 583 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 CNSTQ6PJW8 725 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 SLC30A9Q6PML9 568 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 LRIG3Q6UXM1 1119 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 WASH2PQ6VEQ5 465 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 NEK10Q6ZWH5 1172 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 TBC1D1Q86TI0 1168 aaPredicted RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 SLC9B2Q86UD5 537 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 ZC3HC1Q86WB0 502 aaKnown RBP5.81□□□□□ -1.48
NUP98-208ENST00000461047 TDRPQ86YL5 185 aa5.81□□□□□ -1.48
NUP98-208ENST00000461047 RBM12BQ8IXT5 1001 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms