RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 TFAP2DQ7Z6R9 452 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 SYVN1Q86TM6 617 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 IFNEQ86WN2 208 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 OFCC1Q8IZS5 231 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 CFAP52Q8N1V2 620 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 PGBD5Q8N414 524 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 ZNF555Q8NEP9 628 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 PJA1Q8NG27 643 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 DNASE1L2Q92874 299 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 OSBPL10Q9BXB5 764 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 NUDT4Q9NZJ9 180 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 DNAJB9Q9UBS3 223 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 PTGDR2Q9Y5Y4 395 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 ARL5AQ9Y689 179 aa13.01□□□□□ -0.33
LINC00343-203ENST00000454555 C2orf81A6NN90 581 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 CFAP99D6REC4 459 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 PPP6CO00743 305 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 SYNCRIPO60506 623 aaKnown RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 TBL1XO60907 577 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 CNTN5O94779 1100 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 IL1RNP18510 177 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 CHRM3P20309 590 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 CRHBPP24387 322 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 EEF1B2P24534 225 aaKnown RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 HOXD9P28356 352 aaPredicted RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 UFM1P61960 85 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 SEMA3AQ14563 771 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 RBBP7Q16576 425 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 RGS21Q2M5E4 152 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 ITPRIPL2Q3MIP1 535 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 ALFQ53S48 1182 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 CLEC4FQ8N1N0 589 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 FNDC5Q8NAU1 212 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 GLB1L3Q8NCI6 653 aaPredicted RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 PROKR1Q8TCW9 393 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 VPS33AQ96AX1 596 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 PHF12Q96QT6 1004 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 TRIB3Q96RU7 358 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 CGREF1Q99674 301 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 RBM4BQ9BQ04 359 aaKnown RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 MGME1Q9BQP7 344 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 RBM4Q9BWF3 364 aaKnown RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 BBS2Q9BXC9 721 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 MAGIXQ9H6Y5 334 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 SLC2A4RGQ9NR83 387 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 GIMAP2Q9UG22 337 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 TRMT6Q9UJA5 497 aaKnown RBP13□□□□□ -0.33
LINC00343-203ENST00000454555 FBXO10Q9UK96 956 aa13□□□□□ -0.33
LINC00343-203ENST00000454555 UBA6A0AVT1 1052 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 OTOL1A6NHN0 477 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 UPK1AO00322 258 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 ADH5P11766 374 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 SRFP11831 508 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 PKMP14618 531 aaKnown RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 TYRP14679 529 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 IL2P60568 153 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 GSTM4Q03013 218 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 PCBP2Q15366 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 TSNQ15631 228 aaKnown RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 NEDD8Q15843 81 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 TIGD2Q4W5G0 525 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 GPSM1Q86YR5 675 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 STK40Q8N2I9 435 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 KCNJ9Q92806 393 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 PDLIM5Q96HC4 596 aaKnown RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 PPP3R2Q96LZ3 170 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 MUS81Q96NY9 551 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 WDR12Q9GZL7 423 aaKnown RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 MAGEH1Q9H213 219 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 RAD21L1Q9H4I0 556 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 NTN4Q9HB63 628 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 PDFQ9HBH1 243 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 ERGIC3Q9Y282 383 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 COQ6Q9Y2Z9 468 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 KCTD3Q9Y597 815 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 HEMK1Q9Y5R4 338 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 LRRC14BA6NHZ5 514 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 NEDD8-MDP1E9PL57 170 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 BTN3A1O00481 513 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 KPNA4O00629 521 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 E2F3O00716 465 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 MAGEB3O15480 346 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 KCNH1O95259 989 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 ZBTB11O95625 1053 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 NCK1P16333 377 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 GJA4P35212 333 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 BMXP51813 675 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 CBX3Q13185 183 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 ZNF177Q13360 481 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 IHHQ14623 411 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 GAB4Q2WGN9 574 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 FUT11Q495W5 492 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 ZC3H12BQ5HYM0 836 aaKnown RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 METTL2BQ6P1Q9 378 aaKnown RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 DLEU7Q6UYE1 221 aa12.99□□□□□ -0.33
LINC00343-203ENST00000454555 CIR1Q86X95 450 aaPredicted RBP12.99□□□□□ -0.33
LINC00343-203ENST00000454555 ETFBKMTQ8IXQ9 262 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms