RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 C1orf109Q9NX04 203 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 TRPS1Q9UHF7 1281 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 DLGAP4Q9Y2H0 992 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 NUP214P35658 2090 aaPredicted RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 ARHGEF33A8MVX0 844 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ANKRD28O15084 1053 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 DFNA5O60443 496 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 PRAMEF4O60810 478 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ATG13O75143 517 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 NFATC1O95644 943 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ASLP04424 464 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 LINGO3P0C6S8 592 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 HSD17B1P14061 328 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 FSHRP23945 695 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 PSMA4P25789 261 aaKnown RBP11.48□□□□□ -0.57
VTA1-203ENST00000452973 OR4D2P58180 307 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ZNF234Q14588 700 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 MAPKAPK3Q16644 382 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 PRAMEF9Q5VWM5 478 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 HMBOX1Q6NT76 420 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 UBE2Q1Q7Z7E8 422 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 CFAP206Q8IYR0 622 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 VN1R2Q8NFZ6 395 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 TSPEARQ8WU66 669 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 UBTD2Q8WUN7 234 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 SMARCD2Q92925 531 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 SLC29A1Q99808 456 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 EBPLQ9BY08 206 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 YIPF3Q9GZM5 350 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 DNAJC11Q9NVH1 559 aa11.48□□□□□ -0.57
VTA1-203ENST00000452973 ZNF106Q9H2Y7 1883 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 MYOCOSA0A1B0GUC4 107 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 KANSL1LA0AUZ9 987 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 GFYI3L273 518 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 PDLIM1O00151 329 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 RFXAPO00287 272 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 KPNA5O15131 536 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 B3GALT4O96024 378 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 PRNPP04156 253 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 GSNP06396 782 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 EPHX1P07099 455 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 BCKDHAP12694 445 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 GPR1P46091 355 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 IRF8Q02556 426 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 INPP5AQ14642 412 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 PGS1Q32NB8 556 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 XKR6Q5GH73 641 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 COQ5Q5HYK3 327 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 TANGO2Q6ICL3 276 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 IYDQ6PHW0 289 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 CRTC3Q6UUV7 619 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 HID1Q8IV36 788 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 SLC13A3Q8WWT9 602 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 EGLN2Q96KS0 407 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 APOLD1Q96LR9 279 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 TBCDQ9BTW9 1192 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 TRIM15Q9C019 465 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 DYRK4Q9NR20 520 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 SMOXQ9NWM0 555 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 VAPAQ9P0L0 249 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 ACTR3BQ9P1U1 418 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 SNX6Q9UNH7 406 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 HOXC11O43248 304 aaPredicted RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 MAP3K13O43283 966 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 NELFEP18615 380 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 IL10P22301 178 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 PAX7P23759 505 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 TACR1P25103 407 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 DCDC1P59894 354 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 BNIP2Q12982 314 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 LDLRAP1Q5SW96 308 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 C9orf64Q5T6V5 341 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 DLEU7Q6UYE1 221 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 ETFBKMTQ8IXQ9 262 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 CATSPER1Q8NEC5 780 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 OR52E6Q96RD3 313 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 CGREF1Q99674 301 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 TCF20Q9UGU0 1960 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 YBX2Q9Y2T7 364 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 GOLGA4Q13439 2230 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 ZFC3H1O60293 1989 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 IFRD1O00458 451 aaPredicted RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 SLC16A8O95907 504 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 PGRP06401 933 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 ENO2P09104 434 aaPredicted RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 MPC1LP0DKB6 136 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 HNMTP50135 292 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 PFN3P60673 137 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 HNRNPA1L2Q32P51 320 aaKnown RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 GTDC1Q4AE62 458 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 EP400NLQ6ZTU2 488 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 LRRC70Q7Z2Q7 622 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 CYP2U1Q7Z449 544 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 TRIM46Q7Z4K8 759 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 DNAJC5GQ8N7S2 189 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms