RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CDRT15Q96T59 188 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 EPYCQ99645 322 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 SLF1Q9BQI6 1058 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 HGH1Q9BTY7 390 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 KIFC3Q9BVG8 833 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 TEX12Q9BXU0 123 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 TMEM39BQ9GZU3 492 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 SEMA6AQ9H2E6 1030 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 LRMDAQ9H2I8 198 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAGIXQ9H6Y5 334 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 CPSF2Q9P2I0 782 aaKnown RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 UBA2Q9UBT2 640 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 TSPYL4Q9UJ04 414 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 POU2F3Q9UKI9 436 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 RALYQ9UKM9 306 aaKnown RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 GAB2Q9UQC2 676 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 SOS1Q07889 1333 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 KIF26BQ2KJY2 2108 aa3.16□□□□□ -1.9
HMGB3P12-201ENST00000438745 FAM208AQ9UK61 1670 aaKnown RBP3.15□□□□□ -1.9
HMGB3P12-201ENST00000438745 MAP2P11137 1827 aaKnown RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMEM178BH3BS89 294 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 PLK4O00444 970 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 TCERG1O14776 1098 aaKnown RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 P4HA2O15460 535 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 ADAM20O43506 726 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 FGF17O60258 216 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 AVILO75366 819 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 CENPBP07199 599 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 KRT19P08727 400 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 CETPP11597 493 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 POLR2CP19387 275 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 UGT1A1P22309 533 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 HSD17B4P51659 736 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 PRMT2P55345 433 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 PHEXP78562 749 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM98BQ52LJ0 330 aaKnown RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMEM35AQ53FP2 167 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 STXBP5Q5T5C0 1151 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 ALS2CLQ60I27 953 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 ADAM5Q6NVV9 412 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 TRMT1LQ7Z2T5 733 aaKnown RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 ATG9AQ7Z3C6 839 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 GALNT13Q8IUC8 556 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 EPHX4Q8IUS5 362 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 KLHDC8BQ8IXV7 354 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 PM20D2Q8IYS1 436 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 OR8H2Q8N162 312 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 SLC5A8Q8N695 610 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 MCUQ8NE86 351 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 OR13A1Q8NGR1 328 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 SECISBP2LQ93073 1101 aaKnown RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 DUX3Q96PT4 197 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 GCNAQ96QF7 691 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 GFI1Q99684 422 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 LRRC1Q9BTT6 524 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 APOL6Q9BWW8 343 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 OSGEPL1Q9H4B0 414 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZNF334Q9HCZ1 680 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 CHMP1AQ9HD42 196 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 GIMAP4Q9NUV9 329 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 WSB2Q9NYS7 404 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 CLIC5Q9NZA1 410 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 KLHL9Q9P2J3 617 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 EXO1Q9UQ84 846 aaKnown RBP3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 CACNA1BQ00975 2339 aa3.15□□□□□ -1.91
HMGB3P12-201ENST00000438745 LAMA3Q16787 3333 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 SLX4Q8IY92 1834 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 KIF24Q5T7B8 1368 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 RAB3GAP2Q9H2M9 1393 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 LNP1A1A4G5 178 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 SYNDIG1LA6NDD5 238 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMEM8BA6NDV4 472 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 A6NL46 340 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 SH2B2O14492 632 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 CGAP01215 116 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 AMBPP02760 352 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 ATP1A1P05023 1023 aaKnown RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 CAPN2P17655 700 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 TRIM21P19474 475 aaKnown RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 DNASE1P24855 282 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 HOXD10P28358 340 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 IL15P40933 162 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 LMAN1P49257 510 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 PNLIPRP2P54317 469 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 PLIN5Q00G26 463 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 GTF2H2Q13888 395 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZDHHC20Q5W0Z9 365 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 PLA2G4FQ68DD2 849 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 GPR139Q6DWJ6 353 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 OR7E24Q6IFN5 339 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 LCN10Q6JVE6 187 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 GTF2H2CQ6P1K8 395 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 ASB18Q6ZVZ8 466 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 SLC9B2Q86UD5 537 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 NBPF5PQ86XG9 351 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 DNAAF5Q86Y56 855 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 FBXO39Q8N4B4 442 aa3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 METTL27Q8N6F8 245 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P12-201ENST00000438745 THAP6Q8TBB0 222 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms