RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PRAMEF14Q5SWL7 426 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 PRAMEF13Q5VWM6 474 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 OR2L5Q8NG80 312 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 HIST1H2AAQ96QV6 131 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 CARS2Q9HA77 564 aaKnown RBP15.56■□□□□ 0.08
PTPN13-204ENST00000436978 XPNPEP1Q9NQW7 623 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 P2RX2Q9UBL9 471 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 PACS2Q86VP3 889 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 EFCAB11Q9BUY7 163 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 A0A0X1KG70 313 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 GNALP38405 381 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 SMU1Q2TAY7 513 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 SLC9B1Q4ZJI4 515 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 ATG14Q6ZNE5 492 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 TMEM110Q86TL2 294 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 IQCKQ8N0W5 287 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF483Q8TF39 744 aaPredicted RBP15.56■□□□□ 0.08
PTPN13-204ENST00000436978 CLEC4CQ8WTT0 213 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 SLC13A3Q8WWT9 602 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 DGKBQ9Y6T7 804 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 KBTBD7Q8WVZ9 684 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 FATE1Q969F0 183 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 TRPV5Q9NQA5 729 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 MED31Q9Y3C7 131 aa15.56■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF208O43345 1280 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 SLC9B2Q86UD5 537 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 AMIGO1Q86WK6 493 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 MEIOBQ8N635 442 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 PNO1Q9NRX1 252 aaKnown RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 SPATA7Q9P0W8 599 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 RGS17Q9UGC6 210 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 PRPS1L1P21108 318 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 RBM15BQ8NDT2 890 aaKnown RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CMTM7Q96FZ5 175 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 NDUFS4O43181 175 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF460Q14592 562 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF783Q6ZMS7 281 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 SLCO6A1Q86UG4 719 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF570Q96NI8 536 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 SDHAF3Q9NRP4 125 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 INPPL1O15357 1258 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 DHFRP00374 187 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CFIP05156 583 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 UGT1A3P35503 534 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CTSOP43234 321 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 SP140Q13342 867 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 MCFD2Q8NI22 146 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CHCHD6Q9BRQ6 235 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CCT3P49368 545 aaKnown RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 PRR23BQ6ZRT6 265 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF572Q7Z3I7 529 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 FSTL5Q8N475 847 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 TMEM145Q8NBT3 493 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 ZMIZ2Q8NF64 920 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 IFT46Q9NQC8 304 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 PCDHGB1Q9Y5G3 927 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 SCDO00767 359 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 KDELR3O43731 214 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 TNFRSF21O75509 655 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 IMPDH1P20839 514 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 RPS9P46781 194 aaKnown RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 MMAAQ8IVH4 418 aaKnown RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 BANPQ8N9N5 519 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CLUP10909 449 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CLCN4P51793 760 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 RASSF6Q6ZTQ3 369 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 ANKRD46Q86W74 232 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 OR10A6Q8NH74 314 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 CYB5D2Q8WUJ1 264 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 FCGR1BQ92637 280 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 OMA1Q96E52 524 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 FAM84AQ96KN4 292 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 TUBGCP5Q96RT8 1024 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 SLC32A1Q9H598 525 aa15.55■□□□□ 0.08
PTPN13-204ENST00000436978 MKKSQ9NPJ1 570 aaPredicted RBP15.55■□□□□ 0.08
PTPN13-204ENST00000436978 TP73O15350 636 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 NR2C1P13056 603 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 C2orf27AQ580R0 203 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 IPCEF1Q8WWN9 437 aaPredicted RBP15.54■□□□□ 0.08
PTPN13-204ENST00000436978 TCEA3O75764 348 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 ANGPTL1O95841 491 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 PLA2G16P53816 162 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 PITPNAQ00169 270 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 ZNF792Q3KQV3 632 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 PTPN18Q99952 460 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 DPYSL5Q9BPU6 564 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 CHID1Q9BWS9 393 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.54■□□□□ 0.08
PTPN13-204ENST00000436978 C11orf16Q9NQ32 467 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 FBXL12Q9NXK8 326 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 VPS29Q9UBQ0 182 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 PCDHGB5Q9Y5G0 923 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 PGM3O95394 542 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 RPL26P61254 145 aaKnown RBP15.54■□□□□ 0.08
PTPN13-204ENST00000436978 TLE2Q04725 743 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 HERC3Q15034 1050 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 AMZ1Q400G9 498 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 NCBP2-AS2Q69YL0 99 aa15.54■□□□□ 0.08
PTPN13-204ENST00000436978 CIDEBQ9UHD4 219 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms