RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 NBPF19A0A087WUL8 3843 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 BLACEA4D250 179 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 QSOX1O00391 747 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 CEACAM4O75871 244 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 SUN1O94901 812 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 GAS8O95995 478 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 ZSCAN5DPP0CG00 497 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 AGXTP21549 392 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 STIP1P31948 543 aaKnown RBP12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 FDFT1P37268 417 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 KYNUQ16719 465 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 PAPD7Q5XG87 772 aaKnown RBP12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 SLC13A5Q86YT5 568 aaPredicted RBP12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 KRT222Q8N1A0 295 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 OR4L1Q8NH43 312 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 IL17FQ96PD4 163 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 MARCH4Q9P2E8 410 aaPredicted RBP12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 GUCA1BQ9UMX6 200 aa12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 PTRH2Q9Y3E5 179 aaKnown RBP12.63□□□□□ -0.39
CDCA4P4-201ENST00000435216 USP9YO00507 2555 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 ERI2A8K979 691 aaKnown RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 ZSCAN9O15535 394 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 CNOT3O75175 753 aaKnown RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 VPS4BO75351 444 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 SORBS2O94875 1100 aaKnown RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 APRTP07741 180 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 HBQ1P09105 142 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 MAGP20916 626 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 ADRA1DP25100 572 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 PKLRP30613 574 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 PRAMEP78395 509 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 CRADDP78560 199 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 FASTKD1Q53R41 847 aaKnown RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 LYPLAL1Q5VWZ2 237 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 JMJD6Q6NYC1 403 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 MED25Q71SY5 747 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 SLC22A15Q8IZD6 547 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 TXLNBQ8N3L3 684 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 Q8NA96 180 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 LINC01555Q8NAE3 123 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 GBP5Q96PP8 586 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 RANBP9Q96S59 729 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 DPH2Q9BQC3 489 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 AP1M1Q9BXS5 423 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 CASS4Q9NQ75 786 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 CHRAC1Q9NRG0 131 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 GPR83Q9NYM4 423 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 MAP10Q9P2G4 905 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 IFT80Q9P2H3 777 aaPredicted RBP12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 VPS4AQ9UN37 437 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 PADI2Q9Y2J8 665 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 TCAF1Q9Y4C2 921 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 ZNF451Q9Y4E5 1061 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 SEC16AO15027 2179 aa12.62□□□□□ -0.39
CDCA4P4-201ENST00000435216 KRT87PA6NCN2 255 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 RPL22P35268 128 aaKnown RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 SESN2P58004 480 aaPredicted RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 DCDP81605 110 aaKnown RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 ACVR1Q04771 509 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 GRB7Q14451 532 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 SLC5A12Q1EHB4 618 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 RHBDD2Q6NTF9 364 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 RAB43Q86YS6 212 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 DNAJC22Q8N4W6 341 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 RBMXL3Q8N7X1 1067 aaKnown RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 CCDC89Q8N998 374 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 TMEM102Q8N9M5 508 aaPredicted RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 PPHLN1Q8NEY8 458 aaKnown RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 SGSM3Q96HU1 749 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 TTC1Q99614 292 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 MENTQ9BUN1 341 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 CATSPERZQ9NTU4 200 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 TXLNGQ9NUQ3 528 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 GPN3Q9UHW5 284 aaPredicted RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 TSR3Q9UJK0 312 aaKnown RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 RUVBL2Q9Y230 463 aaKnown RBP12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 MAP4K5Q9Y4K4 846 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 AP1M2Q9Y6Q5 423 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 SHANK1Q9Y566 2161 aa12.61□□□□□ -0.39
CDCA4P4-201ENST00000435216 DPM1O60762 260 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 GPC4O75487 556 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 GP1BBP13224 206 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 CD9P21926 228 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 ALAS2P22557 587 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 FOLR3P41439 243 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 GRIA3P42263 894 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 RAB28P51157 221 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 TERF1P54274 439 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 RRADP55042 308 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 PLOD1Q02809 727 aaPredicted RBP12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 INPP5JQ15735 1006 aaPredicted RBP12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 NKAIN1Q4KMZ8 207 aa12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
CDCA4P4-201ENST00000435216 SLC6A19Q695T7 634 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms