RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RPL38P63173 70 aaKnown RBP14.89□□□□□ -0.03
C9orf3-204ENST00000424143 PHC1P78364 1004 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 IFITM3Q01628 133 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 RAPSNQ13702 412 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 MRPL58Q14197 206 aaKnown RBP14.89□□□□□ -0.03
C9orf3-204ENST00000424143 ZNF181Q2M3W8 571 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 C10orf120Q5SQS8 335 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 IL31Q6EBC2 164 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 OR2T5Q6IEZ7 315 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 ERICH5Q6P6B1 374 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 ZNF783Q6ZMS7 281 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 ADCK1Q86TW2 530 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 SERPINA11Q86U17 422 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 OR2T29Q8NH02 315 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 FRS2Q8WU20 508 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 OR52E6Q96RD3 313 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 SLIRPQ9GZT3 109 aaKnown RBP14.89□□□□□ -0.03
C9orf3-204ENST00000424143 SERHLQ9NQF3 203 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 PLCXD1Q9NUJ7 323 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 AGO1Q9UL18 857 aaKnown RBP14.89□□□□□ -0.03
C9orf3-204ENST00000424143 PCDHB14Q9Y5E9 798 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 RAI2Q9Y5P3 530 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 DGKBQ9Y6T7 804 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 PMF1-BGLAPU3KQ54 211 aa14.89□□□□□ -0.03
C9orf3-204ENST00000424143 PTGES3LE9PB15 166 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 H0Y626 953 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 MANBAO00462 879 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 OR1I1O60431 355 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 XYLBO75191 536 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ULK1O75385 1050 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 TRIM16O95361 564 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 EOMESO95936 686 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ZNF7P17097 686 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 PTPN6P29350 595 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CDKN1CP49918 316 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 IL5RAQ01344 420 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 VAC14Q08AM6 782 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 KRR1Q13601 381 aaKnown RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 NDUFA5Q16718 116 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 DDR2Q16832 855 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 PROX2Q3B8N5 592 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 GGTA1PQ4G0N0 100 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 FBXO48Q5FWF7 155 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 SPANXN4Q5MJ08 99 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ARMC8Q8IUR7 673 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 TXNDC15Q96J42 360 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 MAGEB10Q96LZ2 347 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CDK15Q96Q40 435 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 SPATA9Q9BWV2 254 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 NXF2Q9GZY0 626 aaKnown RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ACOT13Q9NPJ3 140 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 IL17CQ9P0M4 197 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ERVK-18Q9QC07 812 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 RPS6KA6Q9UK32 745 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 PKP3Q9Y446 797 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 EIF3FO00303 357 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 KDM1AO60341 852 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 PRMT3O60678 531 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 SEC22BO75396 215 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 SERPINA1P01009 418 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 AKR1A1P14550 325 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 PFKLP17858 780 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 MAPK1P28482 360 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CD52P31358 61 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 SOX11P35716 441 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 EIF2DP41214 584 aaKnown RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CLK3P49761 638 aaKnown RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 FCGRTP55899 365 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ZNF33BQ06732 778 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 GBX1Q14549 363 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 MAD2L1BPQ15013 274 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ZRANB3Q5FWF4 1079 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 BTLAQ7Z6A9 289 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CYP4Z1Q86W10 505 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ZDHHC21Q8IVQ6 265 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 HS3ST5Q8IZT8 346 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 LIX1Q8N485 282 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 NETO1Q8TDF5 533 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 ESAMQ96AP7 390 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CTRCQ99895 268 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CEP44Q9C0F1 390 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 CWH43Q9H720 699 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 OPTCQ9UBM4 332 aa14.88□□□□□ -0.03
C9orf3-204ENST00000424143 MRPL42Q9Y6G3 142 aaKnown RBP14.88□□□□□ -0.03
C9orf3-204ENST00000424143 OR2A25A4D2G3 310 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 FZD6O60353 706 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 KRT6AP02538 564 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 KRT6BP04259 564 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 CNPP09543 421 aaKnown RBP14.87□□□□□ -0.03
C9orf3-204ENST00000424143 OR4Q2P0C623 313 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 CBSLP0DN79 551 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 PABPC1P11940 636 aaKnown RBP14.87□□□□□ -0.03
C9orf3-204ENST00000424143 BCKDHAP12694 445 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 S100A3P33764 101 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 CBSP35520 551 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 RGRP47804 291 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 PPP3CCP48454 512 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 KRT6CP48668 564 aa14.87□□□□□ -0.03
C9orf3-204ENST00000424143 MASP1P48740 699 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms