RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 DCAF12Q5T6F0 453 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 SPESP1Q6UW49 350 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 CEACAM20Q6UY09 585 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 FAM92BQ6ZTR7 304 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 TRMT10CQ7L0Y3 403 aaKnown RBP14.19□□□□□ -0.14
LIMS1-206ENST00000414829 CPNE9Q8IYJ1 553 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 NKAPQ8N5F7 415 aaKnown RBP14.19□□□□□ -0.14
LIMS1-206ENST00000414829 OR2L8Q8NGY9 312 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 OR8K5Q8NH50 307 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 HMGCLL1Q8TB92 370 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 MCOLN3Q8TDD5 553 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 FBF1Q8TES7 1133 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 JPH3Q8WXH2 748 aaPredicted RBP14.19□□□□□ -0.14
LIMS1-206ENST00000414829 ASB11Q8WXH4 323 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 ANKRD7Q92527 254 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 FGF11Q92914 225 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 SLC41A2Q96JW4 573 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 TAAR9Q96RI9 348 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 RBBP8Q99708 897 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 TRIM54Q9BYV2 358 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 ASCL3Q9NQ33 180 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 SOHLH2Q9NX45 425 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 ACTR10Q9NZ32 417 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 SLC17A6Q9P2U8 582 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 ACSL6Q9UKU0 697 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 PSAT1Q9Y617 370 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 IKBKGQ9Y6K9 419 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 RP1P56715 2156 aa14.19□□□□□ -0.14
LIMS1-206ENST00000414829 A8MU76 341 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 CDRT15L2A8MXV6 281 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 MYO1CO00159 1063 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 CASC3O15234 703 aaKnown RBP14.18□□□□□ -0.14
LIMS1-206ENST00000414829 RRP8O43159 456 aaKnown RBP14.18□□□□□ -0.14
LIMS1-206ENST00000414829 ENO2P09104 434 aaPredicted RBP14.18□□□□□ -0.14
LIMS1-206ENST00000414829 ZNF37AP17032 561 aaPredicted RBP14.18□□□□□ -0.14
LIMS1-206ENST00000414829 NELFEP18615 380 aaKnown RBP14.18□□□□□ -0.14
LIMS1-206ENST00000414829 CDKN2DP55273 166 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 MC2RQ01718 297 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 SLC5A12Q1EHB4 618 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 KBTBD12Q3ZCT8 623 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 RBM20Q5T481 1227 aaKnown RBP14.18□□□□□ -0.14
LIMS1-206ENST00000414829 PROSER1Q86XN7 944 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 ADGRF3Q8IZF5 1079 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 PPM1NQ8N819 430 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 ZNF248Q8NDW4 579 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 OR9A1PQ8NGU1 263 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 LINGO1Q96FE5 620 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 GPR22Q99680 433 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 PITPNM3Q9BZ71 974 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 CDC42EP4Q9H3Q1 356 aaKnown RBP14.18□□□□□ -0.14
LIMS1-206ENST00000414829 ACSS3Q9H6R3 686 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 PDE7BQ9NP56 450 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 FBXO8Q9NRD0 319 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 SLC39A1Q9NY26 324 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 NINJ2Q9NZG7 142 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 NFU1Q9UMS0 254 aa14.18□□□□□ -0.14
LIMS1-206ENST00000414829 A0A0J9YY10 115 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 ARHGEF33A8MVX0 844 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 GFYI3L273 518 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 POLR1CO15160 346 aaPredicted RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 CCNDBP1O95273 360 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 ABHD2P08910 425 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 HIST1H2AGP0C0S8 130 aaPredicted RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 MSL3P1P0C860 447 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 STMN1P16949 149 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 HIST1H2ADP20671 130 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 TNFRSF8P28908 595 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 PRDX3P30048 256 aaKnown RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 ECHS1P30084 290 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 BDKRB1P46663 353 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 KPNA2P52292 529 aaKnown RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 MAPK10P53779 464 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 AP1S2P56377 157 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 USP10Q14694 798 aaKnown RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 PAQR3Q6TCH7 311 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 UBE2R2Q712K3 238 aaPredicted RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 PIWIL4Q7Z3Z4 852 aaKnown RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 MDM1Q8TC05 714 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 SMPDL3AQ92484 453 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 PDLIM5Q96HC4 596 aaKnown RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 PRR11Q96HE9 360 aaPredicted RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 HIST1H2AHQ96KK5 128 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 FCRL4Q96PJ5 515 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 SLC30A3Q99726 388 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 MAP3K3Q99759 626 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 HIST1H2AJQ99878 128 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 MCMBPQ9BTE3 642 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 H2AFJQ9BTM1 129 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 SLC12A9Q9BXP2 914 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 FUT8Q9BYC5 575 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 CHRNA10Q9GZZ6 450 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 XKR8Q9H6D3 395 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 GPAMQ9HCL2 828 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 SIDT1Q9NXL6 827 aaKnown RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 UTP6Q9NYH9 597 aaKnown RBP14.17□□□□□ -0.14
LIMS1-206ENST00000414829 GALPQ9UBC7 116 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 BTRCQ9Y297 605 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 NFS1Q9Y697 457 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 CEP295Q9C0D2 2601 aa14.17□□□□□ -0.14
LIMS1-206ENST00000414829 A0A087WUV0 522 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms