RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 OR5K2Q8NHB8 316 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 MCOLN3Q8TDD5 553 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 ZFPM2Q8WW38 1151 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 SCYL1Q96KG9 808 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 SLC12A9Q9BXP2 914 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 PARVBQ9HBI1 364 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 MED4Q9NPJ6 270 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 CEP295Q9C0D2 2601 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 CPED1A4D0V7 1026 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 SYCE1LA8MT33 242 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 EML2O95834 649 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 VIPP01282 170 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 HIST1H2AGP0C0S8 130 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 HIST1H2ADP20671 130 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 MAGOHP61326 146 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 BIRC2Q13490 618 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 TSNQ15631 228 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 CCDC153Q494R4 210 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 ISCA2Q86U28 154 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 PLD6Q8N2A8 252 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 SLC37A2Q8TED4 501 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 ARL8AQ96BM9 186 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 HIST1H2AHQ96KK5 128 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 GPR78Q96P69 363 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 FERD3LQ96RJ6 166 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 HIST1H2AJQ99878 128 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 MRPL57Q9BQC6 102 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 H2AFJQ9BTM1 129 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 MRPL46Q9H2W6 279 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 ALG9Q9H6U8 611 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 RDH14Q9HBH5 336 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 SCHIP1Q9P0W5 487 aaPredicted RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 CPNE7Q9UBL6 633 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 RNF112Q9ULX5 631 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 PADI4Q9UM07 663 aa16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 CFAP20Q9Y6A4 193 aaKnown RBP16.07■□□□□ 0.16
TSPAN4-208ENST00000409531 NPEPPSL1A6NEC2 478 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 CDC7O00311 574 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 NOBOXO60393 691 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 KERAO60938 352 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 C1orf105O95561 183 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 JUPP14923 745 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 GMPRP36959 345 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 SLC19A1P41440 591 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 FASLGP48023 281 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 GLRBP48167 497 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 AP1S2P56377 157 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 HHEXQ03014 270 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 C14orf28Q4W4Y0 310 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 GUSBP11Q6P575 273 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 SBSNQ6UWP8 590 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 C17orf82Q86X59 251 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 RASGRP3Q8IV61 690 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 SPNS2Q8IVW8 549 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 CACTIN-AS1Q8N1I8 211 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 RAB42Q8N4Z0 105 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 PHC3Q8NDX5 983 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 GPR156Q8NFN8 814 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 OR6C4Q8NGE1 309 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 OR5AR1Q8NGP9 310 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 IFI44Q8TCB0 444 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 NAT6Q93015 286 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 RAD51AP1Q96B01 352 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 SH3KBP1Q96B97 665 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 PTERQ96BW5 349 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 UNKQ9C0B0 810 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 ABCG4Q9H172 646 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 ZNF358Q9NW07 568 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 SIRPGQ9P1W8 387 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 ZNF624Q9P2J8 865 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 MID2Q9UJV3 735 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 OARD1Q9Y530 152 aa16.06■□□□□ 0.16
TSPAN4-208ENST00000409531 BAHCC1Q9P281 2608 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 TRBV23OR9-2A0A075B6M9 112 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 ARHGEF33A8MVX0 844 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 PRPF4O43172 522 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■■■■□ 20.5
TSPAN4-208ENST00000409531 TYROBPO43914 113 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 SPAG7O75391 227 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 SYF2O95926 243 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 S100BP04271 92 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 UBE2IP63279 158 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 CDKL1Q00532 357 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 INSM1Q01101 510 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 OR4D1Q15615 310 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 TTMPQ5BVD1 217 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 TECRLQ5HYJ1 363 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 EFL1Q7Z2Z2 1120 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 GPSM1Q86YR5 675 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 PATE1Q8WXA2 126 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 RAB11FIP5Q9BXF6 653 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 KIR3DX1Q9H7L2 352 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 SLC40A1Q9NP59 571 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 KCNK9Q9NPC2 374 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 TMEM216Q9P0N5 145 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 ADAMTS6Q9UKP5 1117 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 TMCO1Q9UM00 188 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 PDE10AQ9Y233 779 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 PCM1Q15154 2024 aa16.05■□□□□ 0.16
TSPAN4-208ENST00000409531 ASXL3Q9C0F0 2248 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms