RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PCDHGA4Q9Y5G9 962 aa19.41■□□□□ 0.7
CCDC47-202ENST00000403162 OR6C75A6NL08 312 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 ADAM23O75077 832 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 COQ9O75208 318 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 PRKD3O94806 890 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 S100BP04271 92 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-202ENST00000403162 SLC2A4P14672 509 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 IL1RNP18510 177 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 PPM1AP35813 382 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 DCTP40126 519 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 ARPP19P56211 112 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 RPL38P63173 70 aaKnown RBP19.4■□□□□ 0.7
CCDC47-202ENST00000403162 PIGFQ07326 219 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 CYP2A13Q16696 494 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 TRIM16LQ309B1 348 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 MICU2Q8IYU8 434 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 STK40Q8N2I9 435 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 ATAD1Q8NBU5 361 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 EXOC2Q96KP1 924 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 IPPKQ9H8X2 491 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 AKIP1Q9NQ31 210 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 WDR37Q9Y2I8 494 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 CPQQ9Y646 472 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 ZNF99A8MXY4 864 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-202ENST00000403162 STX7O15400 261 aaKnown RBP19.4■□□□□ 0.7
CCDC47-202ENST00000403162 RGS14O43566 566 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 HS6ST1O60243 411 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 NDUFS2O75306 463 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 GABARAPO95166 117 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 IL6P05231 212 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 OXCT1P55809 520 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 PTGR1Q14914 329 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 PLA2G4EQ3MJ16 856 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 FAM174BQ3ZCQ3 159 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 RUNDC3AQ59EK9 446 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 ANKRD34AQ69YU3 496 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 MILR1Q7Z6M3 343 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 SP7Q8TDD2 431 aaPredicted RBP19.4■□□□□ 0.7
CCDC47-202ENST00000403162 CLP1Q92989 425 aaKnown RBP19.4■□□□□ 0.7
CCDC47-202ENST00000403162 ALPK1Q96QP1 1244 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 DGKBQ9Y6T7 804 aa19.4■□□□□ 0.7
CCDC47-202ENST00000403162 ANKRD66B4E2M5 251 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 FFAR2O15552 330 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 XYLBO75191 536 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 INMTO95050 263 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 SOD2P04179 222 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 LINC00271P0C7V0 271 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 SLC6A4P31645 630 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 ACOX1Q15067 660 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 PON2Q15165 354 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 LDLRAP1Q5SW96 308 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 TMEM179BQ7Z7N9 219 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 SPON2Q9BUD6 331 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 ADGRE3Q9BY15 652 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 TRIT1Q9H3H1 467 aaKnown RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 ASIC5Q9NY37 505 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 TMEFF2Q9UIK5 374 aaPredicted RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 AGO1Q9UL18 857 aaKnown RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 RAI2Q9Y5P3 530 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 IQCF5A8MTL0 148 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 GRXCR1A8MXD5 290 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 M0QX08 132 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 SLC28A1O00337 649 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 RAD51BO15315 384 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 F11P03951 625 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 PGRP06401 933 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 ITGAMP11215 1152 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 RAD23AP54725 363 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 CDH4P55283 916 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 RPS3AP61247 264 aaKnown RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 ATG9BQ674R7 924 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 RSPO2Q6UXX9 243 aaPredicted RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 NCCRP1Q6ZVX7 275 aaPredicted RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 DDX53Q86TM3 631 aaKnown RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 HIPK1Q86Z02 1210 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 DCP2Q8IU60 420 aaKnown RBP19.39■□□□□ 0.69
CCDC47-202ENST00000403162 S100ZQ8WXG8 99 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 DPY30Q9C005 99 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 CLMPQ9H6B4 373 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 CCSER2Q9H7U1 834 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 BPIFA1Q9NP55 256 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 GIN1Q9NXP7 522 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 INVSQ9Y283 1065 aa19.39■□□□□ 0.69
CCDC47-202ENST00000403162 KIAA1671Q9BY89 1806 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 TRBV5-3A0A0A0MS03 114 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 GOLGA8CPA6NN73 597 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 FAM220BPB1ANY3 271 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 H3BNC9 293 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 CREG1O75629 220 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 FGF18O76093 207 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 GLUD1P00367 558 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 KCNQ1P51787 676 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 PIWIL3Q7Z3Z3 882 aaKnown RBP19.38■□□□□ 0.69
CCDC47-202ENST00000403162 PLPP6Q8IY26 295 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 ARL10Q8N8L6 244 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 MINDY2Q8NBR6 621 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 DNAJB8Q8NHS0 232 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 FAR1Q8WVX9 515 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 TAMM41Q96BW9 452 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 HERC2P3Q9BVR0 1158 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms