RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PROKR2Q8NFJ6 384 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 ELOA3Q8NG57 546 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 CPT1BQ92523 772 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 SH3YL1Q96HL8 342 aaPredicted RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 OSBPL11Q9BXB4 747 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 BPNT1O95861 308 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 TNFP01375 233 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 ADH5P11766 374 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 CRHR1P34998 444 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 PRKCIP41743 596 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 CSTF1Q05048 431 aaKnown RBP13.51□□□□□ -0.25
VAPA-202ENST00000400000 LAPTM5Q13571 262 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 SUSD1Q6UWL2 747 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 STXBP5LQ9Y2K9 1186 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 KMOO15229 486 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 ZNF20P17024 532 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 ECHS1P30084 290 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 NFKB2Q00653 900 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 LRRC38Q5VT99 294 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 ZYG11AQ6WRX3 759 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 FBXL12Q9NXK8 326 aa13.51□□□□□ -0.25
VAPA-202ENST00000400000 RGS10O43665 173 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 ALPPP05187 535 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 ACSL1P33121 698 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 CRTC2Q53ET0 693 aaPredicted RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 ARHGAP40Q5TG30 622 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 DNAJB7Q7Z6W7 309 aaPredicted RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 OR2T34Q8NGX1 318 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 OR2T3Q8NH03 318 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 TAC3Q9UHF0 121 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 NUP50Q9UKX7 468 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 RAB21Q9UL25 225 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 HOXA10P31260 410 aaPredicted RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 FAUP35544 74 aaKnown RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 FKBP1BP68106 108 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 CARD17Q5XLA6 110 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 MON1BQ7L1V2 547 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 BOLLQ8N9W6 283 aaKnown RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 OR2L8Q8NGY9 312 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TMED9Q9BVK6 235 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 WDR26Q9H7D7 661 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 BRF2Q9HAW0 419 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 GRXCR2A6NFK2 248 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 CDC40O60508 579 aaKnown RBP eCLIP13.5□□□□□ -0.25
VAPA-202ENST00000400000 AP2A1O95782 977 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 UQCRC1P31930 480 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 EIF2S3P41091 472 aaKnown RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 SLBPQ14493 270 aaKnown RBP eCLIP13.5□□□□□ -0.25
VAPA-202ENST00000400000 RBM15BQ8NDT2 890 aaKnown RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 THEM6Q8WUY1 208 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 ZNF358Q9NW07 568 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TRNAU1APQ9NX07 287 aaKnown RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 PRAMEF33A0A0G2JMD5 474 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 NEMP2A6NFY4 417 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 PRAMEF10O60809 474 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 ANGPTL1O95841 491 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 OR12D2P58182 307 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 SYPL2Q5VXT5 272 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TCAIMQ8N3R3 496 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TMEM156Q8N614 296 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 GALNT11Q8NCW6 608 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 MCCC1Q96RQ3 725 aaPredicted RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 MIPEPQ99797 713 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TCF7L1Q9HCS4 588 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TRPV5Q9NQA5 729 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 CXCR1P25024 350 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 ECT2LQ008S8 904 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 SLC38A4Q969I6 547 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 CNDP2Q96KP4 475 aaKnown RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 SMURF1Q9HCE7 757 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 CYP8B1Q9UNU6 501 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 C2orf92A0A1B0GVN3 265 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 MATN3O15232 486 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 INPPL1O15357 1258 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 UBXN7O94888 489 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 CPNE6O95741 557 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 SLC10A7Q0GE19 358 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 TRABD2AQ86V40 505 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 NLGN4YQ8NFZ3 816 aaPredicted RBP13.5□□□□□ -0.25
VAPA-202ENST00000400000 SIPA1Q96FS4 1042 aa13.5□□□□□ -0.25
VAPA-202ENST00000400000 ZNF878C9JN71 531 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 J3KR12 359 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ACVRL1P37023 503 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 CDKN2BP42772 138 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 PTPRCAPQ14761 206 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ABCA11PQ4W5N1 156 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ZNF542PQ5EBM4 170 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 CEP97Q8IW35 865 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 DTX3Q8N9I9 347 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ACMSDQ8TDX5 336 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 BARD1Q99728 777 aaKnown RBP13.49□□□□□ -0.25
VAPA-202ENST00000400000 ANKHQ9HCJ1 492 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 NUDT4Q9NZJ9 180 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 TMEM150CB9EJG8 249 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 DIRAS1O95057 198 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 SNU13P55769 128 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms