RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 CASP8Q14790 479 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 KBTBD12Q3ZCT8 623 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 AARS2Q5JTZ9 985 aaKnown RBP13.32□□□□□ -0.28
SEC13-205ENST00000397101 ZNF470Q6ECI4 717 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 MARK2Q7KZI7 788 aaKnown RBP13.32□□□□□ -0.28
SEC13-205ENST00000397101 SNX20Q7Z614 316 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 OR2W6PQ8NHA6 318 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 ZBTB9Q96C00 473 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 FCRL4Q96PJ5 515 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 TBC1D10AQ9BXI6 508 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 GPR87Q9BY21 358 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 TWSG1Q9GZX9 223 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UGT1A7Q9HAW7 530 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UGT1A10Q9HAW8 530 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 UGT1A8Q9HAW9 530 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 IL26Q9NPH9 171 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 LHX9Q9NQ69 397 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 NSMCE4AQ9NXX6 385 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 MOCS1Q9NZB8 636 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 KLHL3Q9UH77 587 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 LRBAP50851 2863 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 DOPEY1Q5JWR5 2465 aa13.32□□□□□ -0.28
SEC13-205ENST00000397101 H7C0S8 307 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 KATNA1O75449 491 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 NDUFS3O75489 264 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 PIAS1O75925 651 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 KIAA0754O94854 1291 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 SHBGP04278 402 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 INHBAP08476 426 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 XRCC1P18887 633 aaPredicted RBP13.31□□□□□ -0.28
SEC13-205ENST00000397101 DCTP40126 519 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 ARCN1P48444 511 aaKnown RBP13.31□□□□□ -0.28
SEC13-205ENST00000397101 PGDP52209 483 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 XIAPP98170 497 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 CTBP1Q13363 440 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 EFTUD2Q15029 972 aaKnown RBP eCLIP13.31□□□□□ -0.282e-8■■■■■ 42.6
SEC13-205ENST00000397101 UGT8Q16880 541 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 LYPLAL1Q5VWZ2 237 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 MICALCLQ6ZW33 695 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 CYS1Q717R9 158 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 PRSS42Q7Z5A4 293 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 STRA8Q7Z7C7 330 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 TRIM74Q86UV6 250 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 RASGRP3Q8IV61 690 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 LMNTD2Q8IXW0 634 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 TRAM1L1Q8N609 369 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 ANKRD7Q92527 254 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 ULK4Q96C45 1275 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 OR6C1Q96RD1 312 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 AGAP2Q99490 1192 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 C19orf43Q9BQ61 176 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 ZSCAN5AQ9BUG6 496 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 SLC25A23Q9BV35 468 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 TRIM55Q9BYV6 548 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 SLC29A3Q9BZD2 475 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 ACBD3Q9H3P7 528 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 ACSS3Q9H6R3 686 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 PLAC1Q9HBJ0 212 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 ZNHIT2Q9UHR6 403 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 PCYT1BQ9Y5K3 369 aaPredicted RBP13.31□□□□□ -0.28
SEC13-205ENST00000397101 SHANK1Q9Y566 2161 aa13.31□□□□□ -0.28
SEC13-205ENST00000397101 CENPEQ02224 2701 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 UBA6A0AVT1 1052 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 FAM159BA6NKW6 160 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 CXorf49A8MYA2 514 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 ASMTLO95671 621 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 PRSS56P0CW18 603 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 ARNTP27540 789 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 AKT1P31749 480 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 FOXN2P32314 431 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 MAPK9P45984 424 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 CDKN1CP49918 316 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 GFERP55789 205 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 EIF3BP55884 814 aaKnown RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 DCDC1P59894 354 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 NAB1Q13506 487 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 INPP5JQ15735 1006 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 GPR33Q49SQ1 333 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 NADK2Q4G0N4 442 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 ATP13A5Q4VNC0 1218 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 TEDDM1Q5T9Z0 273 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 ZNF787Q6DD87 383 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 ZNF449Q6P9G9 518 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 TMEM26Q6ZUK4 368 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 CHST15Q7LFX5 561 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 SYVN1Q86TM6 617 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 LDB1Q86U70 411 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 BPHLQ86WA6 291 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 LRRC6Q86X45 466 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 PPP1R3BQ86XI6 285 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 DENND6AQ8IWF6 608 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 KLHL6Q8WZ60 621 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 DCUN1D1Q96GG9 259 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 ZIM3Q96PE6 472 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 RAB33BQ9H082 229 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 EPB41L4BQ9H329 900 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 FBXO6Q9NRD1 293 aaPredicted RBP13.3□□□□□ -0.28
SEC13-205ENST00000397101 SMYD2Q9NRG4 433 aa13.3□□□□□ -0.28
SEC13-205ENST00000397101 OGFRQ9NZT2 677 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms