RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ATP6V1E2Q96A05 226 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 HGH1Q9BTY7 390 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 GSTO2Q9H4Y5 243 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 PFDN4Q9NQP4 134 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 PRDM8Q9NQV8 689 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 KLHL14Q9P2G3 628 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 VTI1BQ9UEU0 232 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 HAO1Q9UJM8 370 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 PCTPQ9UKL6 214 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 DOLKQ9UPQ8 538 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 ARL2BPQ9Y2Y0 163 aa13.32□□□□□ -0.28
VAPB-202ENST00000395802 EML5Q05BV3 1969 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 ATXN2Q99700 1313 aaKnown RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 KIR2DS5A0A0G2JLQ3 304 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 A0A0G2JNG1 304 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 KIR2DS3K7RE56 304 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 HRO43593 1189 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 CCNT2O60583 730 aaKnown RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 SP9P0CG40 484 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 MTHFD1P11586 935 aaKnown RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 BDKRB1P46663 353 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 HSPA7P48741 367 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 CSNK1EP49674 416 aaKnown RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 PKNOX1P55347 436 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 GTF2H2Q13888 395 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 KIR2DS5Q14953 304 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 PRRT3Q5FWE3 981 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 CAPN13Q6MZZ7 669 aaPredicted RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 GTF2H2CQ6P1K8 395 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 AGTRAPQ6RW13 159 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 CUZD1Q86UP6 607 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 SYTL1Q8IYJ3 562 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 C10orf82Q8WW14 230 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 CXorf40BQ96DE9 158 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 INSM2Q96T92 566 aaPredicted RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 PKP4Q99569 1192 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 MIPEPQ99797 713 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 STN1Q9H668 368 aaKnown RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 ZNF395Q9H8N7 513 aaPredicted RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 STOX2Q9P2F5 926 aaPredicted RBP13.31□□□□□ -0.28
VAPB-202ENST00000395802 TBC1D29Q9UFV1 150 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 PILRBQ9UKJ0 227 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 WDR37Q9Y2I8 494 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 PLEKHM1Q9Y4G2 1056 aa13.31□□□□□ -0.28
VAPB-202ENST00000395802 HGSO14964 777 aaPredicted RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 TAPBPO15533 448 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 DFNA5O60443 496 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 CRCPO75575 148 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 SLC16A8O95907 504 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 AK4P27144 223 aaPredicted RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 ARRB2P32121 409 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 SLC6A12P48065 614 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 CLCA4Q14CN2 919 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 RPE65Q16518 533 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 RBBP7Q16576 425 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 ZC3H14Q6PJT7 736 aaKnown RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 EFL1Q7Z2Z2 1120 aaKnown RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 TRIM48Q8IWZ4 208 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 RBM12BQ8IXT5 1001 aaKnown RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 OR5AR1Q8NGP9 310 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 THOC1Q96FV9 657 aaKnown RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 SORT1Q99523 831 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 PCBD2Q9H0N5 130 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 NPHS2Q9NP85 383 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 MID1IP1Q9NPA3 183 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 SEMA4BQ9NPR2 832 aaPredicted RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 POT1Q9NUX5 634 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 TAAR2Q9P1P5 351 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 TDRKHQ9Y2W6 561 aaKnown RBP13.3□□□□□ -0.28
VAPB-202ENST00000395802 SLCO1B1Q9Y6L6 691 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 THADAQ6YHU6 1953 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 GON4LQ3T8J9 2241 aa13.3□□□□□ -0.28
VAPB-202ENST00000395802 PRR33A8MZF0 331 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ITM2AO43736 263 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 LYPLA1O75608 230 aaPredicted RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 WDR47O94967 919 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ESRRBO95718 433 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CHEK2O96017 543 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 AGTR2P50052 363 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 RAB28P51157 221 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CCNG1P51959 295 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 PNLIPRP1P54315 467 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CDH13P55290 713 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 IFT88Q13099 833 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 PTCHD3Q3KNS1 767 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ZNF542PQ5EBM4 170 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 PEAR1Q5VY43 1037 aaPredicted RBP13.29□□□□□ -0.28
VAPB-202ENST00000395802 IL27RAQ6UWB1 636 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ATG14Q6ZNE5 492 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 SLC9B2Q86UD5 537 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 KLHDC8AQ8IYD2 350 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 CLYBLQ8N0X4 340 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 TEX9Q8N6V9 391 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 TRPC4APQ8TEL6 797 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 ZNF382Q96SR6 550 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 TMEM79Q9BSE2 394 aa13.29□□□□□ -0.28
VAPB-202ENST00000395802 LRRC61Q9BV99 259 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms