RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 KCNC3Q14003 757 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 DHCR24Q15392 516 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 ERAP2Q6P179 960 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 DLEU7Q6UYE1 221 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 Q6ZVL8 140 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 DPPA4Q7L190 304 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 RGL4Q8IZJ4 473 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 ZBTB8BQ8NAP8 495 aaPredicted RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 DNAJB8Q8NHS0 232 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 ELMO1Q92556 727 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 SCAMP4Q969E2 229 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 ZSWIM3Q96MP5 696 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 INTS7Q9NVH2 962 aaKnown RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 SLAMF8Q9P0V8 285 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 PAIP2BQ9ULR5 123 aaKnown RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 WDR37Q9Y2I8 494 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 C5orf67F2Z3F1 127 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 GMNNO75496 209 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 FAM58BPP0C7Q3 252 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 MAPK9P45984 424 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 FXNQ16595 210 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 MAPKAPK3Q16644 382 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 NRF1Q16656 503 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 C6orf52Q5T4I8 152 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 HENMT1Q5T8I9 393 aaKnown RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 INTS11Q5TA45 600 aaKnown RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 HMBOX1Q6NT76 420 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 PPP4R4Q6NUP7 873 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 TNIP2Q8NFZ5 429 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 SLC13A3Q8WWT9 602 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 HERVK_113Q902F9 699 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 VPS35Q96QK1 796 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 CIB1Q99828 191 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 SH3GL1Q99961 368 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 ELOVL6Q9H5J4 265 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 FARSBQ9NSD9 589 aaKnown RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 DUS2Q9NX74 493 aaKnown RBP12.32□□□□□ -0.44
VPS16-202ENST00000380445 PCDHB3Q9Y5E6 796 aa12.32□□□□□ -0.44
VPS16-202ENST00000380445 ADH1CP00326 375 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 RB1P06400 928 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 HNRNPCP07910 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
VPS16-202ENST00000380445 ADH5P11766 374 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 MAPK1P28482 360 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 WEE1P30291 646 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 ETV3P41162 512 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 SLC6A12P48065 614 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 HMGCS1Q01581 520 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 CREB5Q02930 508 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 CPSF6Q16630 551 aaKnown RBP eCLIP12.31□□□□□ -0.44
VPS16-202ENST00000380445 SGO1Q5FBB7 561 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 RAVER1Q8IY67 606 aaKnown RBP12.31□□□□□ -0.44
VPS16-202ENST00000380445 TBC1D21Q8IYX1 336 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 ADGRG5Q8IZF4 528 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 LIX1Q8N485 282 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 SELENOMQ8WWX9 145 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 SORCS1Q8WY21 1168 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 CENPNQ96H22 339 aaPredicted RBP12.31□□□□□ -0.44
VPS16-202ENST00000380445 TMEM74Q96NL1 305 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 C9orf16Q9BUW7 83 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 AGPAT4Q9NRZ5 378 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 DNAJC11Q9NVH1 559 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 UBAP1Q9NZ09 502 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 NDUFA13Q9P0J0 144 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 SPATA7Q9P0W8 599 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 ZNHIT2Q9UHR6 403 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 LINC01553A4QN01 128 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 C16orf96A6NNT2 1141 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 RSL1D1O76021 490 aaKnown RBP12.31□□□□□ -0.44
VPS16-202ENST00000380445 SLCO2B1O94956 709 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 PRPS2P11908 318 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 CEBPBP17676 345 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 MAP4P27816 1152 aaKnown RBP12.31□□□□□ -0.44
VPS16-202ENST00000380445 PRKCQQ04759 706 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 ZNF33BQ06732 778 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 KIAA0040Q15053 153 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 PTCHD3Q3KNS1 767 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 PDE12Q6L8Q7 609 aaKnown RBP12.31□□□□□ -0.44
VPS16-202ENST00000380445 NRSN1Q8IZ57 195 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 L3MBTL4Q8NA19 623 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 SLC35B4Q969S0 331 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 PPM1MQ96MI6 270 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 RIOK2Q9BVS4 552 aaKnown RBP12.31□□□□□ -0.44
VPS16-202ENST00000380445 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
VPS16-202ENST00000380445 ZFP14Q9HCL3 533 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 ANAPC2Q9UJX6 822 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 TMED5Q9Y3A6 229 aa12.31□□□□□ -0.44
VPS16-202ENST00000380445 PSMD11O00231 422 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 ELFN1P0C7U0 828 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 PABPC4LP0CB38 370 aaKnown RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 PRPH2P23942 346 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 IRS1P35568 1242 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 DGKQP52824 942 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 YBX1P67809 324 aaKnown RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 CBX2Q14781 532 aaPredicted RBP12.3□□□□□ -0.44
VPS16-202ENST00000380445 PTGR1Q14914 329 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 VRK3Q8IV63 474 aa12.3□□□□□ -0.44
VPS16-202ENST00000380445 PAPD5Q8NDF8 572 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms