RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 RHAGQ02094 409 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 BRAT1Q6PJG6 821 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 TAF8Q7Z7C8 310 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 GRPEL2Q8TAA5 225 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 ZBTB26Q9HCK0 441 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 TMEM248Q9NWD8 314 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 TOR4AQ9NXH8 423 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 A0A1W2PRG6 482 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 OAS1P00973 400 aaKnown RBP14.74□□□□□ -0.05
NPHP4-201ENST00000378156 CMPK1P30085 196 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 Q6ZVU0 165 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 AMZ2Q86W34 360 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 HDDC3Q8N4P3 179 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 ARHGAP39Q9C0H5 1083 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 DNAJC25-GNG10A0A024R161 153 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 PGRMC2O15173 223 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 PRG2P13727 222 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 NR4A1P22736 598 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 GRSF1Q12849 480 aaKnown RBP eCLIP14.74□□□□□ -0.05
NPHP4-201ENST00000378156 C2orf27AQ580R0 203 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 SMYD1Q8NB12 490 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 CNOT6Q9ULM6 557 aaKnown RBP14.74□□□□□ -0.05
NPHP4-201ENST00000378156 MRPS17Q9Y2R5 130 aaKnown RBP14.74□□□□□ -0.05
NPHP4-201ENST00000378156 IRAK3Q9Y616 596 aa14.74□□□□□ -0.05
NPHP4-201ENST00000378156 FAM240BA0A1B0GVZ2 78 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 PDLIM1O00151 329 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 TPD52L2O43399 206 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 PFKMP08237 780 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 MED22Q15528 200 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 AHI1Q8N157 1196 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 ZNF296Q8WUU4 475 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 PRICKLE1Q96MT3 831 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 TMEM209Q96SK2 561 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 CXorf21Q9HAI6 301 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 TMEM165Q9HC07 324 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 RASSF1Q9NS23 344 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 OR1F1O43749 312 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 PLOD3O60568 738 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 FSHRP23945 695 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 HNMTP50135 292 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 FAM174BQ3ZCQ3 159 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 GALNT18Q6P9A2 607 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 CELF5Q8N6W0 485 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 LMAN2LQ9H0V9 348 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 RSPH9Q9H1X1 276 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 DPEP2Q9H4A9 486 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 SEC14L3Q9UDX4 400 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 GTPBP1O00178 669 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 INPPL1O15357 1258 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 H6PDO95479 791 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 ADH5P11766 374 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 IL18R1Q13478 541 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 PTPRCAPQ14761 206 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 CHRNA6Q15825 494 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 NAPRTQ6XQN6 538 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 LIX1Q8N485 282 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 DCAF4L2Q8NA75 395 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 EXOSC8Q96B26 276 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 RBM4BQ9BQ04 359 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 RBM4Q9BWF3 364 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 FBRSL1Q9HCM7 1045 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 TLL2Q9Y6L7 1015 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 EI24O14681 340 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 RGS10O43665 173 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 PRAMEF11O60813 436 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 SNAP47Q5SQN1 464 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 RNF44Q7L0R7 432 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 SLC43A3Q8NBI5 491 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 TXNDC5Q8NBS9 432 aaKnown RBP14.73□□□□□ -0.05
NPHP4-201ENST00000378156 KLK6Q92876 244 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 GPR62Q9BZJ7 368 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 EQTNQ9NQ60 294 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 TLR9Q9NR96 1032 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 GIMAP2Q9UG22 337 aa14.73□□□□□ -0.05
NPHP4-201ENST00000378156 WWP2O00308 870 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 KDELR3O43731 214 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 ECI2O75521 394 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 CLK3P49761 638 aaKnown RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 ARPC4P59998 168 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 FAM131AQ6UXB0 335 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 C14orf80Q86SX3 495 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 C11orf65Q8NCR3 313 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 TRPV1Q8NER1 839 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 HTRA1Q92743 480 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 C1orf74Q96LT6 269 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 PDCD10Q9BUL8 212 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 RNF186Q9NXI6 227 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 GALPQ9UBC7 116 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 RUVBL1Q9Y265 456 aaKnown RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 WNT6Q9Y6F9 365 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 RPL4P36578 427 aaKnown RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 RPS14P62263 151 aaKnown RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 MYLK3Q32MK0 819 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 CGB2Q6NT52 195 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 SLC25A24Q6NUK1 477 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 C17orf99Q6UX52 265 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 GPRIN1Q7Z2K8 1008 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 GLB1L3Q8NCI6 653 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-201ENST00000378156 SUN5Q8TC36 379 aa14.72□□□□□ -0.05
NPHP4-201ENST00000378156 CYB5D2Q8WUJ1 264 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms