RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PLEKHG4Q58EX7 1191 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ZNF773Q6PK81 442 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ZNF730Q6ZMV8 503 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 BEND5Q7L4P6 421 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ANKRD46Q86W74 232 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 STON2Q8WXE9 905 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 OR8D1Q8WZ84 308 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 CXorf40BQ96DE9 158 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 CORO1BQ9BR76 489 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 DUSP26Q9BV47 211 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 SLC29A3Q9BZD2 475 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 KCNN2Q9H2S1 579 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ANKRA2Q9H9E1 313 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 TESMINQ9Y4I5 508 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 CDH23Q9H251 3354 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 LCHNA4D1U4 455 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 TBX1O43435 398 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 HTRA2O43464 458 aaPredicted RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 ORC5O43913 435 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 NOBOXO60393 691 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 GADD45GO95257 159 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 CCNDBP1O95273 360 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 KCNE1P15382 129 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 GABRR2P28476 465 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 IL18Q14116 193 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 CBX2Q14781 532 aaPredicted RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 OR2T5Q6IEZ7 315 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 SNX20Q7Z614 316 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 MEIOBQ8N635 442 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 NATD1Q8N6N6 113 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS36-201ENST00000378060 OR2T29Q8NH02 315 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 KIAA1191Q96A73 305 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 C12orf43Q96C57 262 aaKnown RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 C11orf24Q96F05 449 aaPredicted RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 IL1RAPQ9NPH3 570 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 MOCS1Q9NZB8 636 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 SIX4Q9UIU6 781 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 RPL36Q9Y3U8 105 aaKnown RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 ABCB7O75027 752 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ECI2O75521 394 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 CLPXO76031 633 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 FGF19O95750 216 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 EOMESO95936 686 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 EPOP01588 193 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 C9P02748 559 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 SRPRAP08240 638 aaKnown RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 PIK3CBP42338 1070 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ABHD18Q0P651 414 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 TUBA3EQ6PEY2 450 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 OR52J3Q8NH60 311 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 VANGL1Q8TAA9 524 aaPredicted RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 TP53INP1Q96A56 240 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ESAMQ96AP7 390 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 MCMBPQ9BTE3 642 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ACAT2Q9BWD1 397 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 GPN1Q9HCN4 374 aaPredicted RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.23□□□□□ -1.09
VPS36-201ENST00000378060 PCDH10Q9P2E7 1040 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 RWDD3Q9Y3V2 267 aa8.23□□□□□ -1.09
VPS36-201ENST00000378060 ZFP37Q9Y6Q3 630 aaPredicted RBP8.23□□□□□ -1.09
VPS36-201ENST00000378060 ISM1B1AKI9 464 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 OR10H2O60403 315 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 REM1O75628 298 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 PRKD3O94806 890 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 OR5F1O95221 314 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 LINGO3P0C6S8 592 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 LAMP2P13473 410 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 ALDH4A1P30038 563 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 OMPP47874 163 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 AP1S2P56377 157 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 LARS2Q15031 903 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 ZBTB6Q15916 424 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 TIGD6Q17RP2 521 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 IQCCQ4KMZ1 466 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 C15orf39Q6ZRI6 1047 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 USP30Q70CQ3 517 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 CHPFQ8IZ52 775 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 MCCC1Q96RQ3 725 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 PEBP4Q96S96 227 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 S100A13Q99584 98 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 RHBGQ9H310 441 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 RMI1Q9H9A7 625 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 POPDC3Q9HBV1 291 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 PREBQ9HCU5 417 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 MRPS33Q9Y291 106 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 WDR37Q9Y2I8 494 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 OR10H1Q9Y4A9 318 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 TMEM233B4DJY2 109 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 H0YAE9 185 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 STX16O14662 325 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 PI15O43692 258 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 RSL1D1O76021 490 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 ENO2P09104 434 aaPredicted RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 SMPD1P17405 629 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 FPR1P21462 350 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 HNMTP50135 292 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 MAPK12P53778 367 aa8.22□□□□□ -1.09
VPS36-201ENST00000378060 PTGES3Q15185 160 aaKnown RBP8.22□□□□□ -1.09
VPS36-201ENST00000378060 TIGD5Q53EQ6 642 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms