RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 PGRMC2O15173 223 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ALDOAP04075 364 aaKnown RBP18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 IGFALSP35858 605 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 CDH12P55289 794 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 HMGCS1Q01581 520 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SEMG2Q02383 582 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SLC10A2Q12908 348 aaPredicted RBP18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 OAFQ86UD1 273 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ING5Q8WYH8 240 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SLC35C2Q9NQQ7 365 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 NECTIN3Q9NQS3 549 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 IRAK3Q9Y616 596 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 COLEC10Q9Y6Z7 277 aa18.35■□□□□ 0.53
CNTNAP3B-203ENST00000377561 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 HAS3O00219 553 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 STX16O14662 325 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ZNF730Q6ZMV8 503 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 PEX5LQ8IYB4 626 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ENDOVQ8N8Q3 282 aaKnown RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 TRPV3Q8NET8 790 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 NEK7Q8TDX7 302 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 FCRL3Q96P31 734 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 MTERF1Q99551 399 aaKnown RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 FESP07332 822 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 RAPSNQ13702 412 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 DAG1Q14118 895 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 CHRNA6Q15825 494 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 CNPY1Q3B7I2 92 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 LRRC70Q7Z2Q7 622 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 P2RY8Q86VZ1 359 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 PRRG4Q9BZD6 226 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 TESMINQ9Y4I5 508 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 DGKBQ9Y6T7 804 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 TFPIP10646 304 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 VARSP26640 1264 aaKnown RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ECT2LQ008S8 904 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SOX4Q06945 474 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ZNF252P-AS1Q0IIN9 211 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 LRRC73Q5JTD7 316 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 OR2AP1Q8NGE2 309 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 DENND1AQ8TEH3 1009 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SLC39A3Q9BRY0 314 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 POPDC3Q9HBV1 291 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 MTMR11A4FU01 709 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 FAM189A1O60320 539 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 CCNB2O95067 398 aa18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 PITX1P78337 314 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ZNF514Q96K75 400 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 PRICKLE1Q96MT3 831 aaPredicted RBP18.34■□□□□ 0.53
CNTNAP3B-203ENST00000377561 A0A1W2PRU2 124 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 BCAS2O75934 225 aaPredicted RBP18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 MYCLP1P12525 358 aaPredicted RBP18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 WASP42768 502 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 GDPD4Q6W3E5 623 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 WFIKKN2Q8TEU8 576 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 LRRC42Q9Y546 428 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 FAM86C2PA6NEL3 165 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 OR1F1O43749 312 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 NOBOXO60393 691 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 CMPK1P30085 196 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 AP1S2P56377 157 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 RHDQ02161 417 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 PPIGQ13427 754 aaKnown RBP eCLIP18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SNAPC1Q16533 368 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ATP13A5Q4VNC0 1218 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 UBXN11Q5T124 520 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 RTL4Q6ZR62 310 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 COX4I2Q96KJ9 171 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SYT11Q9BT88 431 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 SLC29A3Q9BZD2 475 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 ADAMTS5Q9UNA0 930 aa18.33■□□□□ 0.53
CNTNAP3B-203ENST00000377561 BEST1O76090 585 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 CBSLP0DN79 551 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 CBSP35520 551 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 SLC11A1P49279 550 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 PTGES3Q15185 160 aaKnown RBP18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 ALKBH2Q6NS38 261 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 MAMDC4Q6UXC1 1216 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 C14orf80Q86SX3 495 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 GALNT15Q8N3T1 639 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 MIPEPQ99797 713 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 CCDC106Q9BWC9 280 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 OAZ3Q9UMX2 235 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 TP73O15350 636 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 MAGEB3O15480 346 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 GPR32O75388 356 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 ZNF678Q5SXM1 525 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 ANO7Q6IWH7 933 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 GJD3Q8N144 294 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 SMG8Q8ND04 991 aaKnown RBP18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 CDADC1Q9BWV3 514 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 ACTR3BQ9P1U1 418 aa18.33■□□□□ 0.52
CNTNAP3B-203ENST00000377561 EFNA1P20827 205 aaPredicted RBP18.32■□□□□ 0.52
CNTNAP3B-203ENST00000377561 PTPN5P54829 565 aa18.32■□□□□ 0.52
CNTNAP3B-203ENST00000377561 LARS2Q15031 903 aaKnown RBP18.32■□□□□ 0.52
CNTNAP3B-203ENST00000377561 AKIRIN2Q53H80 203 aa18.32■□□□□ 0.52
CNTNAP3B-203ENST00000377561 NAPRTQ6XQN6 538 aa18.32■□□□□ 0.52
CNTNAP3B-203ENST00000377561 CDHR3Q6ZTQ4 885 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms