RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 KLF10Q13118 480 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TUBB3Q13509 450 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 ITGA9Q13797 1035 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SPIDRQ14159 915 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 RBBP5Q15291 538 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 KCTD11Q693B1 232 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CRTC1Q6UUV9 634 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 ZYG11AQ6WRX3 759 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 RBM44Q6ZP01 1051 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TECPR1Q7Z6L1 1165 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 DHDDSQ86SQ9 333 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CLEC14AQ86T13 490 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TSPAN33Q86UF1 283 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 KCNMB4Q86W47 210 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SPACA3Q8IXA5 215 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 KYQ8NBH2 561 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 FAM46DQ8NEK8 389 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 PPHLN1Q8NEY8 458 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 FCRL5Q96RD9 977 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 GPR22Q99680 433 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CCDC3Q9BQI4 270 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SLC25A51Q9H1U9 297 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SUDS3Q9H7L9 328 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CARS2Q9HA77 564 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TCF7L2Q9NQB0 619 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 RAD18Q9NS91 495 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 C20orf96Q9NUD7 363 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TRNAU1APQ9NX07 287 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SYBUQ9NX95 663 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 UTP6Q9NYH9 597 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TMEM216Q9P0N5 145 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SEPT10Q9P0V9 454 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CNOT11Q9UKZ1 510 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 EMCNQ9ULC0 261 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 PNMA8BQ9ULN7 279 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 PSMD13Q9UNM6 376 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 COL27A1Q8IZC6 1860 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 C1orf232A0A0U1RR37 186 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 TEX51A0A1B0GUA7 166 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 SMIM31A0A1B0GVY4 71 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ANKRD66B4E2M5 251 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 KALRNO60229 2985 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 UGT1A9O60656 530 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 PRB1P04280 392 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 RBP1P09455 135 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 LINGO3P0C6S8 592 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 MYF5P13349 255 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 GLB1P16278 677 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 PAX7P23759 505 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 SLC12A2P55011 1212 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 POU4F1Q01851 419 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ROR2Q01974 943 aaKnown RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 PTSQ03393 145 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ZBTB17Q13105 803 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 BIRC2Q13490 618 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 CYLC2Q14093 348 aaPredicted RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ISXQ2M1V0 245 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 SPATS1Q496A3 300 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 C16orf46Q6P387 395 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 KLC3Q6P597 504 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ADAMTSL4Q6UY14 1074 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 RAPH1Q70E73 1250 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 GPR155Q7Z3F1 870 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 PIWIL4Q7Z3Z4 852 aaKnown RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 GALNT7Q86SF2 657 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 PDSS2Q86YH6 399 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 SLC22A9Q8IVM8 553 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 CNTN4Q8IWV2 1026 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ALDH16A1Q8IZ83 802 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 LSM14AQ8ND56 463 aaKnown RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ADCY4Q8NFM4 1077 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 GPR156Q8NFN8 814 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 CEP70Q8NHQ1 597 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 DTX3LQ8TDB6 740 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 SLC26A7Q8TE54 656 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 DTNBP1Q96EV8 351 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 IMP4Q96G21 291 aaKnown RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 HIC2Q96JB3 615 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ZNF578Q96N58 590 aaPredicted RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 AGAP3Q96P47 875 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 TTC1Q99614 292 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 TRMOQ9BU70 441 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 LGR4Q9BXB1 951 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ABCG8Q9H221 673 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 DPEP2Q9H4A9 486 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 EPB41L1Q9H4G0 881 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 SYNDIG1Q9H7V2 258 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 COG4Q9H9E3 785 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 UGT1A7Q9HAW7 530 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 UGT1A10Q9HAW8 530 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 UGT1A8Q9HAW9 530 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 PAPOLBQ9NRJ5 636 aaKnown RBP10.17□□□□□ -0.78
COL5A1-202ENST00000371820 RAB26Q9ULW5 256 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 SLC17A4Q9Y2C5 497 aa10.17□□□□□ -0.78
COL5A1-202ENST00000371820 ZCWPW2A0A1B0GU75 182 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 MATN2O00339 956 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms