RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DEFB110Q30KQ9 67 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 PRR30Q53SZ7 412 aaPredicted RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 C1orf189Q5VU69 101 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 MRPL14Q6P1L8 145 aaKnown RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 TLDC1Q6P9B6 456 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 MRGPREQ86SM8 312 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 KIAA1328Q86T90 577 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 TAB3Q8N5C8 712 aaPredicted RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 HES6Q96HZ4 224 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 FER1L6-AS2Q96M78 137 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 RANBP9Q96S59 729 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 MFRPQ9BY79 579 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 LUZP4Q9P127 313 aa15.44■□□□□ 0.06
CKS1B-202ENST00000368436 GPN3Q9UHW5 284 aaPredicted RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 PTRH2Q9Y3E5 179 aaKnown RBP15.44■□□□□ 0.06
CKS1B-202ENST00000368436 NBPF19A0A087WUL8 3843 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 HEATR9A2RTY3 570 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 ISM1B1AKI9 464 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 TCP11X1B4DZS4 312 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 ZSCAN9O15535 394 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-202ENST00000368436 KDM1AO60341 852 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 OR1I1O60431 355 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 CNOT3O75175 753 aaKnown RBP15.43■□□□□ 0.06
CKS1B-202ENST00000368436 SEMA7AO75326 666 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 FTCDO95954 541 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 FOLR3P41439 243 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 GCGRP47871 477 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 KYNUQ16719 465 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 SYTL3Q4VX76 610 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 C4orf17Q53FE4 359 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 DNAJC21Q5F1R6 531 aaKnown RBP15.43■□□□□ 0.06
CKS1B-202ENST00000368436 TSTD2Q5T7W7 516 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 VWA5B1Q5TIE3 1220 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 TMEM139Q8IV31 216 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 SLC22A15Q8IZD6 547 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 DNAAF3Q8N9W5 541 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 OR2Y1Q8NGV0 311 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 SSC4DQ8WTU2 575 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 HDAC10Q969S8 669 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 PTERQ96BW5 349 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 TTC1Q99614 292 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 MENTQ9BUN1 341 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 AP1M1Q9BXS5 423 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 ETNK1Q9HBU6 452 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 CUEDC1Q9NWM3 386 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-202ENST00000368436 IFT80Q9P2H3 777 aaPredicted RBP15.43■□□□□ 0.06
CKS1B-202ENST00000368436 DHCR7Q9UBM7 475 aaKnown RBP15.43■□□□□ 0.06
CKS1B-202ENST00000368436 SLC2A6Q9UGQ3 507 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 PLAGL1Q9UM63 463 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 SRPK3Q9UPE1 567 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 PLCL2Q9UPR0 1127 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 CDYLQ9Y232 598 aa15.43■□□□□ 0.06
CKS1B-202ENST00000368436 SPTBN1Q01082 2364 aaKnown RBP15.43■□□□□ 0.06
CKS1B-202ENST00000368436 A0A0U1RQJ8 604 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 F8W8V4 182 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 PEX12O00623 359 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 GPC4O75487 556 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 GAS8O95995 478 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 GOT2P00505 430 aaKnown RBP15.42■□□□□ 0.06
CKS1B-202ENST00000368436 IGHEP01854 428 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 ADRA1DP25100 572 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 PKLRP30613 574 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 CCR7P32248 378 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 RAB28P51157 221 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 SOX8P57073 446 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 KIF5AQ12840 1032 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 RAPSNQ13702 412 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 OASLQ15646 514 aaKnown RBP15.42■□□□□ 0.06
CKS1B-202ENST00000368436 PLEKHN1Q494U1 663 aaPredicted RBP15.42■□□□□ 0.06
CKS1B-202ENST00000368436 NKAIN1Q4KMZ8 207 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 DCAF10Q5QP82 559 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 AFTPHQ6ULP2 937 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 IGFL3Q6UXB1 125 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 ZNF534Q76KX8 674 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 ZNF655Q8N720 491 aaPredicted RBP15.42■□□□□ 0.06
CKS1B-202ENST00000368436 OR4L1Q8NH43 312 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 BAG1Q99933 345 aaPredicted RBP15.42■□□□□ 0.06
CKS1B-202ENST00000368436 CARD6Q9BX69 1037 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 TXLNGQ9NUQ3 528 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 P4HTMQ9NXG6 502 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 EURLQ9NYK6 297 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 IMPACTQ9P2X3 320 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 PLEKHB1Q9UF11 243 aaPredicted RBP15.42■□□□□ 0.06
CKS1B-202ENST00000368436 NDOR1Q9UHB4 597 aa15.42■□□□□ 0.06
CKS1B-202ENST00000368436 LIASO43766 372 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 KLHL41O60662 606 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 ONECUT2O95948 504 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 UMODP07911 640 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 FDFT1P37268 417 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 GRIA1P42261 906 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 GRB7Q14451 532 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 SEMA3AQ14563 771 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 MYBPC3Q14896 1274 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 NLRP9Q7RTR0 991 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 PPP1R32Q7Z5V6 425 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 VRK3Q8IV63 474 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 FAM20CQ8IXL6 584 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 TXLNBQ8N3L3 684 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 GALNT16Q8N428 558 aa15.41■□□□□ 0.06
CKS1B-202ENST00000368436 LINC01555Q8NAE3 123 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms