RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 SOX17Q9H6I2 414 aaPredicted RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 RCOR3Q9P2K3 495 aaPredicted RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 DHCR7Q9UBM7 475 aaKnown RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 PCYOX1Q9UHG3 505 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 MRPS33Q9Y291 106 aaKnown RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 R3HDM2Q9Y2K5 976 aaKnown RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 PRAMEF33A0A0G2JMD5 474 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 A0A0G2JN53 185 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 TARM1B6A8C7 271 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 FAM47E-STBD1D6RA91 191 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 E7ESA3 106 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 H3BNX3 289 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 ALOX15BO15296 676 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 RAD51BO15315 384 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 PCDHGA12O60330 932 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 DPM1O60762 260 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 PRAMEF10O60809 474 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 POU2F2P09086 479 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 INHBBP09529 407 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 MYCLP1P12525 358 aaPredicted RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 COX7A2P14406 83 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 EZRP15311 586 aaKnown RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 COMTP21964 271 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 CMPK1P30085 196 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 NEK2P51955 445 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 NDST2P52849 883 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 FMO1Q01740 532 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 TMEM115Q12893 351 aaPredicted RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 GPS1Q13098 491 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 SLC13A2Q13183 592 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 CHRNA6Q15825 494 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 LINC00114Q6XXX2 140 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 LIPIQ6XZB0 460 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 ZNF574Q6ZN55 896 aaPredicted RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 IGDCC3Q8IVU1 814 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 SIRT6Q8N6T7 355 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 ENDOVQ8N8Q3 282 aaKnown RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 FAM174AQ8TBP5 190 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 BRSK1Q8TDC3 778 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 CA5BP1Q8WTZ4 195 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 IQCDQ96DY2 449 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 PRICKLE1Q96MT3 831 aaPredicted RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 CATSPER2Q96P56 530 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 GABRG3Q99928 467 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 ZSCAN5AQ9BUG6 496 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 LRRC3Q9BY71 257 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 DEFB126Q9BYW3 111 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 OSBPL8Q9BZF1 889 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 RNF32Q9H0A6 362 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 KDM4CQ9H3R0 1056 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 RMI1Q9H9A7 625 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 CWC15Q9P013 229 aaKnown RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 UVRAGQ9P2Y5 699 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 FKBPLQ9UIM3 349 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 FARSAQ9Y285 508 aaKnown RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 PCDHGA1Q9Y5H4 931 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 EPN1Q9Y6I3 576 aaPredicted RBP3.69□□□□□ -1.82
SMC1B-201ENST00000357450 TACC2O95359 2948 aa3.69□□□□□ -1.82
SMC1B-201ENST00000357450 A0A088AWK7 358 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 NSG1A0A0A6YYJ2 146 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 BLACEA4D250 179 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 D6RAR5 112 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 FAM72CH0Y354 149 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 VAPBO95292 243 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 TP53P04637 393 aaPredicted RBP3.68□□□□□ -1.82
SMC1B-201ENST00000357450 ITGA2BP08514 1039 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 SMIM18P0DKX4 95 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 LIPCP11150 499 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 NME1P15531 152 aaKnown RBP3.68□□□□□ -1.82
SMC1B-201ENST00000357450 ZNF10P21506 573 aaPredicted RBP3.68□□□□□ -1.82
SMC1B-201ENST00000357450 CES1P23141 567 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 NSG1P42857 185 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 CHRNA4P43681 627 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 NPY2RP49146 381 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 CCR4P51679 360 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 VAV2P52735 878 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 CDK3Q00526 305 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 GBE1Q04446 702 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 RGS1Q08116 209 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 SERINC3Q13530 473 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 MUM1Q2TAK8 710 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.68□□□□□ -1.82
SMC1B-201ENST00000357450 KBTBD12Q3ZCT8 623 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 CFAP157Q5JU67 520 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 FAM72AQ5TYM5 149 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 LAIR2Q6ISS4 152 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 FAM72DQ6L9T8 149 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 PNCKQ6P2M8 343 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 RAB44Q7Z6P3 723 aaPredicted RBP3.68□□□□□ -1.82
SMC1B-201ENST00000357450 EXOC3L1Q86VI1 746 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 FAM72BQ86X60 149 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 FAM71AQ8IYT1 594 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 MAML2Q8IZL2 1156 aaPredicted RBP3.68□□□□□ -1.82
SMC1B-201ENST00000357450 PDIK1LQ8N165 341 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 FAM13CQ8NE31 585 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 ASZ1Q8WWH4 475 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 HTR3CQ8WXA8 447 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 CSPG4P5Q96PW8 444 aa3.68□□□□□ -1.82
SMC1B-201ENST00000357450 FAM111AQ96PZ2 611 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms