RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 UBAP1Q9NZ09 502 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 ADAMDEC1O15204 470 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 TMCC2O75069 709 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 EEDO75530 441 aaKnown RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 DNTTP04053 509 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 KELP23276 732 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 HTR1EP28566 365 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 ASMTP46597 345 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 HMGCS1Q01581 520 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 IL18R1Q13478 541 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 PTPRCAPQ14761 206 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 QPRTQ15274 297 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 BLOC1S3Q6QNY0 202 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 RNF19BQ6ZMZ0 732 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 COLGALT2Q8IYK4 626 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 ZNF461Q8TAF7 563 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 PPCDCQ96CD2 204 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 SERHL2Q9H4I8 314 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 SERHLQ9NQF3 203 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 EVLQ9UI08 416 aaPredicted RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 MRPS17Q9Y2R5 130 aaKnown RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 GPC6Q9Y625 555 aaPredicted RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 PSMD11O00231 422 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 SERPINI2O75830 405 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 C11orf91Q3C1V1 193 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 PLEKHG6Q3KR16 790 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 KANK2Q63ZY3 851 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 MYRFLQ96LU7 910 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 IL23AQ9NPF7 189 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 PRSS51A0A1B0GVH4 220 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 HAPLN1P10915 354 aaPredicted RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 HTR1BP28222 390 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 HLCSP50747 726 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 SKP1P63208 163 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 BORAQ6PGQ7 559 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 CHST9Q7L1S5 443 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 CHST15Q7LFX5 561 aaPredicted RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 C14orf80Q86SX3 495 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 ARL14EPQ8N8R7 260 aaPredicted RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 SMAD5Q99717 465 aaKnown RBP14.45□□□□□ -0.1
NUP50-201ENST00000347635 YIPF2Q9BWQ6 316 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 DNAJC15Q9Y5T4 150 aa14.45□□□□□ -0.1
NUP50-201ENST00000347635 RPL17P18621 184 aaKnown RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 SMIM11AP58511 58 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 NFKB2Q00653 900 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 GRM2Q14416 872 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 MZT2AQ6P582 158 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 PLEKHM3Q6ZWE6 761 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 ZNF513Q8N8E2 541 aaPredicted RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 RNFT2Q96EX2 444 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 SLC29A1Q99808 456 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 SMURF2Q9HAU4 748 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 NLE1Q9NVX2 485 aaPredicted RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 TMEM181Q9P2C4 612 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 FCF1Q9Y324 198 aaKnown RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 KCNE2Q9Y6J6 123 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 NME4O00746 187 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 HOXA11P31270 313 aaPredicted RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 DNAJA1P31689 397 aaKnown RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 AGTR2P50052 363 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 BCAP31P51572 246 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 GK3PQ14409 553 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 COQ5Q5HYK3 327 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 ZZZ3Q8IYH5 903 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 TLR9Q9NR96 1032 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 TOR4AQ9NXH8 423 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 PGLSO95336 258 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 POP4O95707 220 aaKnown RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 HPRP00739 348 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 PPP1R8Q12972 351 aaKnown RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 CST9Q5W186 159 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 SLC34A3Q8N130 599 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 C11orf65Q8NCR3 313 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 PHC3Q8NDX5 983 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 OR52J3Q8NH60 311 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 PTPN18Q99952 460 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 RETREG1Q9H6L5 497 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 AIG1Q9NVV5 245 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 PCDHB3Q9Y5E6 796 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 ANKDD1BA6NHY2 528 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 DYRK3O43781 588 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 CNTN5O94779 1100 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 MVKQ03426 396 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 UPP1Q16831 310 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 C6orf136Q5SQH8 315 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 GCNT6Q5T4J0 391 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 KIAA1324Q6UXG2 1013 aaKnown RBP14.44□□□□□ -0.1
NUP50-201ENST00000347635 NEK10Q6ZWH5 1172 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 TRAPPC5Q8IUR0 188 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 C1orf74Q96LT6 269 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 CEP295NLQ96MC4 621 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 ZDHHC4Q9NPG8 344 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.44□□□□□ -0.1
NUP50-201ENST00000347635 TESMINQ9Y4I5 508 aa14.44□□□□□ -0.1
NUP50-201ENST00000347635 COL4A1P02462 1669 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 H0Y858 1186 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 FOXD2O60548 495 aaPredicted RBP14.43□□□□□ -0.1
NUP50-201ENST00000347635 NBNO60934 754 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 FDXRP22570 491 aa14.43□□□□□ -0.1
NUP50-201ENST00000347635 SRSF11Q05519 484 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms